Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1328 ATGGAAGCCGACGAGGTTAAGTGCCTGATGGAAGAGCTCACCGAAGAGTACAAAGGGAATGCCTATAATCTCATCTCCAAGAACTGCAAACATTTCTATAATGATGATTGCATCAGACTCACCGAAAATCCTATACCAAATTGGGTTAAACGTCTTGCTAGAATCGGTATTTGGATAATGGTGTTGATGATTAGCGATTCACTGAGATGCAGGGTTTTTGTGCAATTGTGTTCTTCCGATGACATTGAACTCAACGGAGGTGAGCATCACAGAATAGAAGATAAGCACTGTTGTGAAGGAGAGAAGCAAGCACTAACAAGTGAGTCCAATAATAATAACAATAGTAAAGTGACTGCTTCTAATTCAGCATTCGTCAGGTTCAGGACAACAGGTGAAGCCAGGGTTGAAGCTGCAGCAGCCGCTATGGTTCTGAAGACGGAGCTATGTCGTTTTAGTGGGGGAAAGATCTACCCGGGGAAGGGCATCAGATTTGTTCGCTCTGATTCTCAGGTCTTTTTGTTTGCCAACTCAAAATGCAAGAGGTACTTCCACAACAGATTGAAGCCATCAAAGCTCACCTGGACTGCCATGTACAGGAAGCAACACAAGAAGGACATTGCCCAAGAAGCTGTGAGGAAGAGGCGTCGCACAACCAAGAAGCCTTACTCTAGGTCTATTGTTGGTGCTACTTTGGAAGTTATCCAAAAGAAAAGAACTGAGAAACCAGAGGTTCGAGATGCTGCTAGAGAAGCCGCTCTCCGTGAGATTAAGGAGAGGATCAAGAAGACAAAGGATGAGAAGAAGGCAAAGAAGGCAGAAGTGATGGCCAAGGCACAAAAGGGACATGGAAAAGGAAACGTTCCCAAGGGTGCTGTCCCTAAAGGTCCTAAGCTTGGAGGAGGTGGCGGGAAGCGCTGA 918 0.4564 MEADEVKCLMEELTEEYKGNAYNLISKNCKHFYNDDCIRLTENPIPNWVKRLARIGIWIMVLMISDSLRCRVFVQLCSSDDIELNGGEHHRIEDKHCCEGEKQALTSESNNNNNSKVTASNSAFVRFRTTGEARVEAAAAAMVLKTELCRFSGGKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVRKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKAQKGHGKGNVPKGAVPKGPKLGGGGGKR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1328 305 FunFam 60S ribosomal protein L24 144 205 - -
Lele29g1328 305 Gene3D - 211 279 - -
Lele29g1328 305 Gene3D PPPDE domains 1 78 IPR042266 -
Lele29g1328 305 PANTHER 60S RIBOSOMAL PROTEIN L24 145 280 IPR000988 -
Lele29g1328 305 ProSiteProfiles PPPDE domain profile. 1 65 IPR008580 GO:0008233
Lele29g1328 305 Coils Coil 253 277 - -
Lele29g1328 305 CDD Ribosomal_L24e_L24 144 197 IPR000988 -
Lele29g1328 305 SMART 4TRASH 149 187 IPR011017 -
Lele29g1328 305 MobiDBLite consensus disorder prediction 259 305 - -
Lele29g1328 305 Pfam PPPDE putative peptidase domain 3 60 IPR008580 GO:0008233
Lele29g1328 305 MobiDBLite consensus disorder prediction 259 278 - -
Lele29g1328 305 Gene3D Ribosomal protein L24e 144 205 IPR038630 -
Lele29g1328 305 Pfam Ribosomal protein L24e 145 208 IPR000988 -
Lele29g1328 305 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 147 199 - -
Lele29g1328 305 ProSitePatterns Ribosomal protein L24e signature. 151 168 IPR023442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1328 Lele-ChrLele29 19920174 19926531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1328 142 298 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 84.076 1.69e-84 249