Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1324 ATGGCTTCTCTGAGAGTTCCCGAGGTTGCTGCTCCAATCCAAGACAGCGAGCGACTCAGAAAGGCTTTTCAAGGATTTGGAACGGATGAGGAGGCTGTGATATTGGTATTGGGACACAGAAATGCAAACCAAAGGAAGAAAATTAGAGAAACCTATCAGCAGCTTTACAGTGAATCACTTATTGATCGTTTAGAGTCTGAACTCTCTGGAGACTTCAGACATGCAGTGATTCTATGGACAATTGATCCTCCAGAAAGGGATGCAAAATTGGCAAATGCTGCATTGAAGGCTAGGAGAAAAGGGATTAAAGAACTACAAGTTCTCATTGAAATAGCATGCGCATCGTCTCCTAACCATCTAATGGCTGTGAGGCAGGCTTACTGCTCTCTCTTCGACTGCTCACTGGAGGAGGACATTGTATCCTATGTTTACAAGCCCCTCAGTAAGCTTTTGGTGGGCCTAGTGAGCTCCTATAGGTATGATAAAGAGGTTGTAGATTCCGAGGCTGTGATGTTGGAGGCAGCAAGACTGAATGAAGCCATCAACAAAAAGCAATTAAACCATGATCACATTATTTGGATACTTAGCACCAGAAATGTTTTCCAGCTCAGGGCAACTTTTGCATGCTACAAGCAACTATATGGGAATACATTGGACCAGGATATCAAAAACTGTGGAAAGGGAGATTTGGAGTCACTCTTAAATGTGATAGTATGGTGCATAGATTGCCCTGAGAAACATTTTGCTAAGGTTGTAAGAGACTCAATTGTTGGGCTAGGAACTGATGAAGATTCTCTCACTAGAGCTATTGTAACTCGAGCCGAAATCGACTTGTTGAAAGTTAGAGTGGAGTATGCCAGCATGTACAAATCCAGTCTTGATGATGGAGTCGTCGGAGATACCTCAGGAGACTACAGAAAGTTCTTGATGACTTTGCTTGGGAAAATAATCTGA 954 0.4287 MASLRVPEVAAPIQDSERLRKAFQGFGTDEEAVILVLGHRNANQRKKIRETYQQLYSESLIDRLESELSGDFRHAVILWTIDPPERDAKLANAALKARRKGIKELQVLIEIACASSPNHLMAVRQAYCSLFDCSLEEDIVSYVYKPLSKLLVGLVSSYRYDKEVVDSEAVMLEAARLNEAINKKQLNHDHIIWILSTRNVFQLRATFACYKQLYGNTLDQDIKNCGKGDLESLLNVIVWCIDCPEKHFAKVVRDSIVGLGTDEDSLTRAIVTRAEIDLLKVRVEYASMYKSSLDDGVVGDTSGDYRKFLMTLLGKII 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1324 317 SMART annex3 187 237 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 SMART annex3 260 312 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 SMART annex3 106 154 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 FunFam Annexin 82 155 - -
Lele29g1324 317 Gene3D Annexin 244 316 IPR037104 GO:0005509|GO:0005544
Lele29g1324 317 FunFam Annexin 168 242 - -
Lele29g1324 317 FunFam Annexin 243 315 - -
Lele29g1324 317 ProSitePatterns Annexin repeat signature. 260 312 IPR018252 GO:0005509|GO:0005544
Lele29g1324 317 ProSiteProfiles Annexin repeat profile. 243 314 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Lele29g1324 317 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Lele29g1324 317 PRINTS Annexin family signature 300 313 IPR001464 GO:0005509|GO:0005544
Lele29g1324 317 PRINTS Annexin family signature 256 276 IPR001464 GO:0005509|GO:0005544
Lele29g1324 317 ProSiteProfiles Annexin repeat profile. 82 156 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 Gene3D Annexin 169 242 IPR037104 GO:0005509|GO:0005544
Lele29g1324 317 SUPERFAMILY Annexin 8 314 IPR037104 GO:0005509|GO:0005544
Lele29g1324 317 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Lele29g1324 317 ProSiteProfiles Annexin repeat profile. 168 239 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 Gene3D Annexin 82 155 IPR037104 GO:0005509|GO:0005544
Lele29g1324 317 Pfam Annexin 87 141 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 Pfam Annexin 248 312 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 Pfam Annexin 14 77 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 Pfam Annexin 174 234 IPR018502 GO:0005509|GO:0005544
Lele29g1324 317 FunFam Annexin 1 81 - -
Lele29g1324 317 PANTHER ANNEXIN 12 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1324 Lele-ChrLele29 19896480 19900170 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1324 29 19896480 19900170 Lele31g0254 31 2592993 2596679 hybridization