Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1323 ATGGCACCCATCAATCAACATGTCGAAGCTCTTGCAACTGCTTTCTCAGGAAATGGAATTGATGAGAAATCGGTAATATCAATATTGGGAAAATGGGAACCAAAGGAAAGAGAAGCTTTCCGAGAGGCATCTCCCAACTTCTTTAAAAAGGATGAACGGAACTTTCACAAGTTGGATGATCATTGTGTTCGTCTTCTCAAGCATGAATTCATGCGTTTCAAGAATGCTGTGGTGCTACGCGCGATGCATGCGTGGGAAAGAGACGCGCGGCTGGCGAAGGAGGCATTGAAGAAGGGCCCACAGGCGTACGGAGTGCTGATTGAGATCGCATGCACCAGATCATCTGAGGAACTCTTTGGAGCCAGAAGGGCTTACCATTCCCTCTTTGATCACTCCTTTGAGGAGGAAATCGCTACTCACGTCCACACCAACGAACGCAAGCTGCTGGTAGCACTAGTGAGCGCATATAGATATGAAGGTCCAAAGGTGAAAGGTGAGATTGCCAAATCAGAAGCCCAAGCCCTTTTCAACATAATTAAGAATAATGGGCCAAACAAGCCCATTATTGAAAATGATGAAATCGTAAGGATTCTATCAACAAGAAGCAAGCTTCATATTCAAGCCATATACAAATATTACCATGAAATATCTGGCAATTACCTTGATGAGGATCTTGCGGACTTCAGGTTGAAAGAGACTGTGCAATGCCTTTGTGCTCCTCATACCTACTTCTCTAAGGTTTTGGAAGCAGCAATGAGAAGTGAAGATAAGAATATAAAGAAGGCATTGACTCGTGTGATTGTTACAAGAGCGGATATAGATATGAGCAAAATCAAAGAAGTGTACCAAAAGTTGTTTGGAGTTCCTTTATCCCACAAAATTGCTGACGTGGCAAAGGGAAACTATAAGGATTTCTTGCTAGCTTTGATTGCAAGAGAGGAGAATAATTAG 951 0.429 MAPINQHVEALATAFSGNGIDEKSVISILGKWEPKEREAFREASPNFFKKDERNFHKLDDHCVRLLKHEFMRFKNAVVLRAMHAWERDARLAKEALKKGPQAYGVLIEIACTRSSEELFGARRAYHSLFDHSFEEEIATHVHTNERKLLVALVSAYRYEGPKVKGEIAKSEAQALFNIIKNNGPNKPIIENDEIVRILSTRSKLHIQAIYKYYHEISGNYLDEDLADFRLKETVQCLCAPHTYFSKVLEAAMRSEDKNIKKALTRVIVTRADIDMSKIKEVYQKLFGVPLSHKIADVAKGNYKDFLLALIAREENN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1323 316 PANTHER ANNEXIN 6 309 - -
Lele29g1323 316 FunFam annexin D4 153 241 - -
Lele29g1323 316 Pfam Annexin 87 152 IPR018502 GO:0005509|GO:0005544
Lele29g1323 316 Pfam Annexin 243 309 IPR018502 GO:0005509|GO:0005544
Lele29g1323 316 SMART annex3 260 309 IPR018502 GO:0005509|GO:0005544
Lele29g1323 316 SMART annex3 190 237 IPR018502 GO:0005509|GO:0005544
Lele29g1323 316 SMART annex3 103 152 IPR018502 GO:0005509|GO:0005544
Lele29g1323 316 FunFam Annexin 83 152 - -
Lele29g1323 316 Gene3D Annexin 84 149 IPR037104 GO:0005509|GO:0005544
Lele29g1323 316 Gene3D Annexin 150 242 IPR037104 GO:0005509|GO:0005544
Lele29g1323 316 SUPERFAMILY Annexin 5 311 IPR037104 GO:0005509|GO:0005544
Lele29g1323 316 FunFam annexin D4 242 311 - -
Lele29g1323 316 ProSiteProfiles Annexin repeat profile. 83 154 IPR018502 GO:0005509|GO:0005544
Lele29g1323 316 ProSiteProfiles Annexin repeat profile. 239 311 IPR018502 GO:0005509|GO:0005544
Lele29g1323 316 PRINTS Annexin family signature 179 205 IPR001464 GO:0005509|GO:0005544
Lele29g1323 316 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Lele29g1323 316 PRINTS Annexin family signature 297 310 IPR001464 GO:0005509|GO:0005544
Lele29g1323 316 PRINTS Annexin family signature 16 38 IPR001464 GO:0005509|GO:0005544
Lele29g1323 316 Gene3D Annexin 243 311 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1323 Lele-ChrLele29 19887880 19891810 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1323 29 19887880 19891810 Lele31g0255 31 2601308 2605221 hybridization