Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1321 ATGGCTACCTTGGTTGCTCCTAATCAAATCTCTCATGTTCAAGATGCTGAGGCTCTTTACAAGGCCTTCAAAGGATGGGGAACTGATGAGAAGGCAGTAATAACAATATTAGGTCACAGAACTTCTTATCAAATTCAGCTCATCAGACAATCTTATGAACAACTTTACCAAGAGAATCTCGTCAAACGCCTCGAGTCTGAGCTCTCTGGTGAATTTGAGAGAGCAGTGTATCGATGGGTGTTGGAACCAAGAGATAGGGATGCAGTGTTGGCAAACGTGGCCATTAGAAATAGCAAGAATGTTGATTACAGTGTCATTGTGGAGATCGCTTGTATTTATTCTTCTGAAGAGCTCTTGGCTGTGAGACGAGCCTATCACAATCGTTATAAGCATTCTTTGGAAGAAGATGCGGCTGCTAATACCACTGGTCATCTTCGCCAGCTTTTGGTGGGGTTGGTGAGCTCGTACAGGTATGAAGGTGAGGAGATAAATGGGAGGTTGGCACAAAGTGAGGCTAATATTCTTCATGATGCTCTTAAACAAAAGAATGGCAATTATGAAGAAGTTATAAGGATTCTTACTACAAGAAGCAAGTCTCAGCTCGTTGCAACTTTCAATCGCTACAGAGATGATCGTGCCACTTCCATCACTAAGAAATTGATGGATGATGCATCTGATGATTTCCTGAGGGCAGTGCACATTGTCATTCGATGCATCAACGACCATAAGAAGTACTATGAAAAGGTTCTGAGAAATGCGATTAAAAGGATAGGGGATAATCATGAGGACGCACTGACTCGAGTGATCGTGACGAGGGCTGAGAAGGATTTGAAGGACATAAAAGATGTTTATTACAAGAGGAACAGTGAGCAGCTGGCCAATTCTGTGTCCAAGGAAGTTTCTGGAGATTACAAGAAGTTTCTTCTCACTCTCATTAATTAA 942 0.4214 MATLVAPNQISHVQDAEALYKAFKGWGTDEKAVITILGHRTSYQIQLIRQSYEQLYQENLVKRLESELSGEFERAVYRWVLEPRDRDAVLANVAIRNSKNVDYSVIVEIACIYSSEELLAVRRAYHNRYKHSLEEDAAANTTGHLRQLLVGLVSSYRYEGEEINGRLAQSEANILHDALKQKNGNYEEVIRILTTRSKSQLVATFNRYRDDRATSITKKLMDDASDDFLRAVHIVIRCINDHKKYYEKVLRNAIKRIGDNHEDALTRVIVTRAEKDLKDIKDVYYKRNSEQLANSVSKEVSGDYKKFLLTLIN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1321 313 FunFam Annexin 1 81 - -
Lele29g1321 313 Pfam Annexin 14 76 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 Pfam Annexin 171 232 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 Pfam Annexin 99 152 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 Pfam Annexin 248 311 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 ProSiteProfiles Annexin repeat profile. 82 154 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 ProSiteProfiles Annexin repeat profile. 166 237 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 SUPERFAMILY Annexin 3 313 IPR037104 GO:0005509|GO:0005544
Lele29g1321 313 FunFam Annexin 166 240 - -
Lele29g1321 313 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Lele29g1321 313 Gene3D Annexin 243 313 IPR037104 GO:0005509|GO:0005544
Lele29g1321 313 Gene3D Annexin 166 240 IPR037104 GO:0005509|GO:0005544
Lele29g1321 313 PRINTS Plant annexin signature 226 244 IPR009118 -
Lele29g1321 313 PRINTS Plant annexin signature 161 181 IPR009118 -
Lele29g1321 313 PRINTS Plant annexin signature 119 133 IPR009118 -
Lele29g1321 313 ProSiteProfiles Annexin repeat profile. 241 313 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 SMART annex3 100 152 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 SMART annex3 262 311 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 SMART annex3 183 235 IPR018502 GO:0005509|GO:0005544
Lele29g1321 313 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Lele29g1321 313 PRINTS Annexin family signature 299 312 IPR001464 GO:0005509|GO:0005544
Lele29g1321 313 PRINTS Annexin family signature 255 275 IPR001464 GO:0005509|GO:0005544
Lele29g1321 313 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Lele29g1321 313 PRINTS Annexin family signature 174 200 IPR001464 GO:0005509|GO:0005544
Lele29g1321 313 FunFam Annexin 82 153 - -
Lele29g1321 313 PANTHER ANNEXIN 13 311 - -
Lele29g1321 313 FunFam Annexin 242 313 - -
Lele29g1321 313 Gene3D Annexin 82 153 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1321 Lele-ChrLele29 19877418 19880103 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1321 29 19877418 19880103 Lele31g0257 31 2613105 2615949 hybridization