Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1292 ATGCCAGGCTTCGATTCTCAGTTACCAGTTCCAAATGCACGCCATACAGAGGGAAGCACGGTTGAATCTTTTCAAGTTTCTGACTTTGGAGCCTTTGATCAATCAGTGAGATATCGTTTAGATGATGCTGTTAACTTGGCTGGAGACCAAGTTTATAACTCACTCAAAGCAAGTAGTCAAACAAATTCTCTTGGTCCCATTCCTGTTGGTAGTTTTGATAAGTTTCCAATTTCACTTGAAATAAGCAAATTCACTAAGCAATCAGAGTCCCAGGTTTTGCAGTTGCAAAAGGTCCAACTGCCAAATTTGGTAACCATATCAGGTGGTAATACAGAAAACCAGGTGGAGTCTGCCATGGCTGATGTCAGTCCCAGGACAGATATTTCTACAGATGCTGATACCGATGAAAAGAATGGGCGGTTTGATAGAAGTCTGTCCAATGCTGCTGGTGCTTCTGATTCCAGTGACAGATCAAAGGATAAATTAGATCAGAAGACTCTCCGTAGGCTTGCTCAGAATCGGGAGGCTGCAAGAAAAAGCCGGTTGAGAAAGAAAGCTTATGTCCAGCAGCTAGAAAGTAGTCGGTTGAAGTTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGACAGCAGGGAATCTTCATATCAAGCTCAGGTGACCAGGCACATTCAATGGGTGGAAATGGGGCCATGGCATTTGATGTAGAATATTCTAGGTGGCTAGAAGAGCAGAATCGACAAATGAATGAGCTAAGAGCAGCTGTAAACTCCCATGCAAGTGATACAGAACTTCGCATGATTATTGATGGTATATTGGCACATTATGATGAAATTTTTAAGCTGAAGAGCTCTGCTGCTAAGAATGATGTTTTCCATTTGTTGTCTGGCATGTGGAAAACACCTGCTGAGAGATGTTTTCTATGGCTTGGTGGTTTTCGGTCATCGGAACTCCTCAAGCTTTTGGTAAATCAACTGGAACCTCTTACCGAGCAGCAGTTGGTCGGTATTACCAACTTGCAGCAATCGTCTCAACAGGCAGAAGATGCATTATCACAGGGTATGGAAGCATTGCAGCAGTCTCTAGCTGAAACACTGGCCAGTGGATCCCTTGGTTCGTCTGGTTCTTCAGGAAATGTGGCGAATTACATGGGCCAAATGGCTATGGCCATGGGTAAACTGGGAACCCTTGAGGGCTTTATTCGACAGGCCGACAATCTGAGGCAGCAAACACTGCAACAAATGCACCGAATATTGACAACTCGTCAGTCTGCTCGCGCCTTGCTCGCTATACATGATTATTTCTCTCGGCTGCGCGCTCTCAGTTCCCTCTGGCTGGCTCGTCCGAGAGATTGA 1353 0.4523 MPGFDSQLPVPNARHTEGSTVESFQVSDFGAFDQSVRYRLDDAVNLAGDQVYNSLKASSQTNSLGPIPVGSFDKFPISLEISKFTKQSESQVLQLQKVQLPNLVTISGGNTENQVESAMADVSPRTDISTDADTDEKNGRFDRSLSNAAGASDSSDRSKDKLDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMGGNGAMAFDVEYSRWLEEQNRQMNELRAAVNSHASDTELRMIIDGILAHYDEIFKLKSSAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLAETLASGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1292 450 Pfam Seed dormancy control 247 322 IPR025422 GO:0006351|GO:0043565
Lele29g1292 450 FunFam BZIP family transcription factor 164 213 - -
Lele29g1292 450 Gene3D - 164 216 - -
Lele29g1292 450 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 168 183 IPR004827 GO:0003700|GO:0006355
Lele29g1292 450 SMART brlzneu 161 224 IPR004827 GO:0003700|GO:0006355
Lele29g1292 450 MobiDBLite consensus disorder prediction 128 142 - -
Lele29g1292 450 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 163 207 IPR004827 GO:0003700|GO:0006355
Lele29g1292 450 MobiDBLite consensus disorder prediction 107 167 - -
Lele29g1292 450 CDD bZIP_HBP1b-like 165 217 - -
Lele29g1292 450 PANTHER TRANSCRIPTION FACTOR TGA9 100 449 - -
Lele29g1292 450 Coils Coil 184 211 - -
Lele29g1292 450 Coils Coil 241 261 - -
Lele29g1292 450 Pfam bZIP transcription factor 165 205 IPR004827 GO:0003700|GO:0006355
Lele29g1292 450 SUPERFAMILY Leucine zipper domain 165 208 IPR046347 GO:0003700|GO:0006355
Lele29g1292 450 ProSiteProfiles DOG1 domain profile. 230 447 IPR025422 GO:0006351|GO:0043565
Lele29g1292 450 MobiDBLite consensus disorder prediction 107 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1292 Lele-ChrLele29 19463912 19471871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1292 119 450 bZIP Transcription Factor Family AT3G12250 81.627 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele29g1292 DOG1 3.9e-33 No_clan