Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1288 ATGTCTTTATTGGGCCTATCGTTGATGGATGAAGAAGAGGAAGCATGTTTGAAGCCTAGAAACAACAACCCTAGCCTCCTCTCTCGCCATATTGAAGAGATTTCGTGCAAGTTTTTAATTGATCATTTTGGAGGTTTGATTACTGCCTTCAAAAATGGTAAATATGCGCCATGCCAATACACTGACACCAAAGCATCATATGGCACATATGATTGCAACGATCCAACTGCGTTGACATGTTTTGCATCTCGCGTTTTGGGCTATAAGCGTTTCTTCAAACGAGCTCAGCCGGAGGCGTCGACCTTCCTTAAAGATGACTGCTTGAAGATAAATTGTACCGTCCGTGTTGTGGTTTCTTCCATAGATTGCTCAAAATTAAACACAGTACTGGTTCCTGAGTCTGATATCGGAGCACATTTTGGCATGCTTTTAGAGAATGAGGAAGGATCAGACATTACATTCTCTGTTTCTGTGGAAAAGTTTCATGCACATAAGCTTGTATTGGCTGCCCGTTCTAGTAAATTTGAGACTGAATTTTTCAATAAGATGGGGCAAGATGATCATGAAATCATTGTTGCTGATATTGCAGTATATCCTTTGCCTGGTTCTCTAATGTTCTTGAGCCCTACTGTTGAGCAGGCACTGCTTCATTTTATCTATAAAGATACTCTTATAGAAGATGAAGAGCTCGTCATGTCATATTCTTCACTCGCATCAGTATCTGACATATTTGCTGCAAAGTTGTTAGCTGCTGCAGAAAAGTATGGCTTGCCAAGACTAAACTGTTGTGTGAATCCATACTTTGCAAAGACATTTCTATAA 822 0.4015 MSLLGLSLMDEEEEACLKPRNNNPSLLSRHIEEISCKFLIDHFGGLITAFKNGKYAPCQYTDTKASYGTYDCNDPTALTCFASRVLGYKRFFKRAQPEASTFLKDDCLKINCTVRVVVSSIDCSKLNTVLVPESDIGAHFGMLLENEEGSDITFSVSVEKFHAHKLVLAARSSKFETEFFNKMGQDDHEIIVADIAVYPLPGSLMFLSPTVEQALLHFIYKDTLIEDEELVMSYSSLASVSDIFAAKLLAAAEKYGLPRLNCCVNPYFAKTFL 273
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1288 273 SUPERFAMILY POZ domain 132 261 IPR011333 -
Lele29g1288 273 Gene3D Potassium Channel Kv1.1; Chain A 117 272 IPR011333 -
Lele29g1288 273 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 62 261 IPR045005 GO:0016567
Lele29g1288 273 SMART BTB_4 150 272 IPR000210 GO:0005515
Lele29g1288 273 ProSiteProfiles BTB domain profile. 150 228 IPR000210 GO:0005515
Lele29g1288 273 Pfam BTB/POZ domain 142 261 IPR000210 GO:0005515
Lele29g1288 273 SUPERFAMILY TRAF domain-like 78 119 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele29g1288 Lele-ChrLele29 19407348 19409871 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele29g1288 BTB 1.2e-14 CL0033