Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1265 ATGGCTGGAGTAGCCGGAGCTTCATTGCCGGCGATCAAAGTGGCCGCACTTTGCGGCTCGCTGCGCAAAGGTAATCAAGAATATCGTGAGGTTGTTGGGAGACGGGTCTTTACAGTAACTGGCACGAGAGCTGATGAGGAGACCATTGATAGATTAATTGAGACAGGATATAACACCCTGGCAGAAATTCAAGAACGGCACGAAGCAGTTAGAGATGTTGAGAGGAAACTTCTTGAATTACAACAGCTGATCTCTGAAGTGGCATATGCTGAGATGCAATAG 282 0.4752 MAGVAGASLPAIKVAALCGSLRKGNQEYREVVGRRVFTVTGTRADEETIDRLIETGYNTLAEIQERHEAVRDVERKLLELQQLISEVAYAEMQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1265 93 Pfam Syntaxin 25 57 IPR006011 GO:0016020
Lele29g1265 93 Pfam Syntaxin 58 88 IPR006011 GO:0016020
Lele29g1265 93 Gene3D - 17 89 - -
Lele29g1265 93 SUPERFAMILY t-snare proteins 26 88 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1265 Lele-ChrLele29 18763698 18765431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1265 26 88 SNARE and Associated Proteins AT3G03800 60.494 1.66e-24 92.0