Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1246 ATGAGCATGTTAGGCCTGCGAGACCTACTTCTCATAGCTCCAAATCATTCTTCTCTGCACCAGCAGCAGCAACAACCCCAACAACAGGACCATTCGAACCTTCATCATCATCTTCCTTCTTCTGCTTCTCTCAGCGTCGGTCTCGGCATTTTCCCTCTCCTTACTGCCACTCCTTGCATCCCCAATGACCTCCCTCACGATTCCGCTGATCACAATAATCATCATCAGAATACTGCCAACCATTCCAATTTCTGGAACCTCAAGATGTGTCCGGCGGATGTGGCGAATTCTGCCAAGAAACGAGTGATCGATGTGGAAGGCGAAGAGAATGGGATTTTTGGGGGTGATTTTAGGGTCTGTCAGGATTGTGGGAATCGCGCCAAGAAAGATTGTGGGTATAGACGATGCAGGACTTGTTGTAAGGGACGTGGGTACAATTGTAGCACTCATCTCAAGAGCACGTGGGTCCCCGCCGCTCGGCGCCGCGAGCGCCAAATGACCGTTCTTGCTGCCGCTGGCGGTGCTTCTGGGTCGCCTCCCGGTTCTAAGAGGCCTAGACCGTTCGGGCCGTCACAGAATGCTGCCACCACTTCTCATAGTTCTGCCTCCAACGCTACCACGCCAAGAAGCTTAGATACTAGCTCTTGTCACCAAGATGCTAGTTTCAAACAGTCTTTACCAGGTCATGTTCGTGTGCCTGCGGTATTCAGGTGCCATAGAGTTTCAGCTACTGGTAATGGCGAAGATGAGTTTGCATACATGACCACAGTTCATATCAGTGGCCATGTTTTCAAGGGGTTTCTTTATGATCAAGGTGCTGATGGGAAAAGCACAATCCCATGTGTTTCGGAACTTCAACTGGGAAATTATAGCAGTGAAAAGAATAGGGAATGTTCTTCTCCAATTGGTGTCCCAACCAATAATGCATACCCTGCTTCTGGCTGTTGA 948 0.4968 MSMLGLRDLLLIAPNHSSLHQQQQQPQQQDHSNLHHHLPSSASLSVGLGIFPLLTATPCIPNDLPHDSADHNNHHQNTANHSNFWNLKMCPADVANSAKKRVIDVEGEENGIFGGDFRVCQDCGNRAKKDCGYRRCRTCCKGRGYNCSTHLKSTWVPAARRRERQMTVLAAAGGASGSPPGSKRPRPFGPSQNAATTSHSSASNATTPRSLDTSSCHQDASFKQSLPGHVRVPAVFRCHRVSATGNGEDEFAYMTTVHISGHVFKGFLYDQGADGKSTIPCVSELQLGNYSSEKNRECSSPIGVPTNNAYPASGC 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1246 315 MobiDBLite consensus disorder prediction 18 38 - -
Lele29g1246 315 Pfam Domain of unknown function (DUF702) 119 274 - -
Lele29g1246 315 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 226 272 IPR006511 -
Lele29g1246 315 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 21 300 IPR007818 GO:0003700|GO:0006355
Lele29g1246 315 MobiDBLite consensus disorder prediction 171 218 - -
Lele29g1246 315 MobiDBLite consensus disorder prediction 189 218 - -
Lele29g1246 315 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 119 161 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1246 Lele-ChrLele29 18180717 18182073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1246 1 310 C2H2 Transcription Factor Family AT5G12330 40.810 9.40e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele29g1246 DUF702 3.2e-55 No_clan