Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1222 ATGGTAATTACAACAATCATGACACACAAATCCTCGTTTCTTCTCTCATCCTTCTTCCACTTTCTCTCCTTACTTATTGCAGGCCATGCAACAGGCTTCAGCTCAATAATACTAAATCCATCTCCACAACGAACACTACAAGAAAACAGCGTTTTTCTTGCAGAAGAAAACGCAGAGCCGTCTGATTATCGGTATGCATGTTTGGACCAAAGTGGTGTAGCTCCATCAAGCAAATACCAAAGCAATCTCAAGAGTCTCATATCTTCACTTTCTTCTGATGCTTCAACCAATAATGGATTTGGTAACAGAACTGCAGGTAGTGATCAAGATATGGTGTTTGGGCTTTATCTTTGTAGAGGGGATGTGAATTCAAGTTTGTGTCATTCTTGTGTTCAAGATTCTAGCAGATTGATCCAACAACATTGTCCCAACAATGCTACTGCAGTTTTATGGTACCCATTTTGCCTTCTCAGGTACTCAAACCAGAATTTCATCGGCAATATAACACTAAGACCTCGGATTCCCATGTTTGATGCATCACAAAACTTCACAAGTGCAGGAGAGTTTGACAGTGATGCTAGGATTCTGATGAACGGTTTGATTCAGACAGGTTCGGAGACAAACCTAATGTTTGGGACACATGTGTTCAACATAAATGGCACCCAGAAAAGGTATGGTTGGGTTCAGTGCAGCCGAGACATAACCAGTGAAGAGTGCAGAACATGTCTGAGCAATATGCTTGAAGATGTTGAGAATTGCTGTGAAGGCAAGAGGGTTTGGAGAATCTTTTCTCCTAGTTGTATTGTCATGTATGAGACTCAGCCTTTCTTTGTAAATAACACTGGGTTGATTGCTCCAACATACCAGCCAGGTGAGGAAAGTAGTAACAGGTCAATGCTTATAGTCATCATCGTTATAAGTGTAGTAGTAGTACTAGCTGTACTGGTTTTCTGCAGAATCTACTTCAGGTTCTTGAGAAAGAAAAAAGACAAACAAGCAGTGAAGGAAGATGGGCTAAATCCAGTATTTTCTCAAGATCAAAATGATGAAGAGAATGCTATGAGTGCTGACCTTTCTATGATGTCCTTGAAAATTATTCTTGAAACTACTTGTAACTTTTCTGATGAGTTTAAATTGGGAAAAGGTGGATTTGGCTCTGTTTACAAGGGAGTTTTACCTGATGGGAAGGAAATAGCAGTAAAAAGGCTGTCAAAAACTTCAGGGCAAGGATTAAAAGAGTTCAAGAATGAAGTGATATTGATTGCAAAATTGCAACATCGGAACCTTGTGAGATTATTAGCCTGCTGCATCGAAGAAAATGAAAAGCTACTTGTTTATGAGTACATGCCTAATTCAAGCCTCGATTTTCACCTCTTCAATATAGAGAGGCGTTCGAAGTTGGAATGGAATATGCGATTGAGTATTATTAATGGAATTGCAAAAGGTCTTTTATATCTCCATGAAGACTCTAGATTGAGGGTTATTCACAGGGATTTAAAAACTAGTAACATATTATTAGACCATGAAATGAATCCAAAAATTTCAGATTTCGGATTAGCAAGAGCTTTTGGAGATGGCCAAAGGGAAGCAAATACTATTAGAGTTGTGGGTACCTATGGTTACATGGCTCCAGAATATGCTATGGAAGGCTTGTTTTCAGTAAAATCTGATGTTTTTAGCTTTGGGGTTCTTCTACTAGAAATCATTAGTGGGAAAAAGAATAGTGGGTTCTATCTTTCAGAACATGGTCAAAGCCTTCTCATATATGCATGGAGGCTCTGGAGTGAAGGGAAGGGCTTGGACCTAATGGATCCAATACTAGAAATGTCATTTGAACCTTCTGAAGTTGTCAAGTATATCCACATTGGCCTCCTATGTGTACAAGAAGATGCAGCAGACAGACCAACAATGTCAAGTGTTGTTCTTATGCTTGCAAGTGACTCAGTGAATCTTCCAAGGCCAACACAACCTGCATTTTCTGTGGGAAGAAGTTTCATGGAGAAAGAGTCTTCATCAAACAATACTACCCATGACTCCATTAATGGCGTAACTATTTCTGAAGTTGTTGCTAGATGA 2076 0.3926 MVITTIMTHKSSFLLSSFFHFLSLLIAGHATGFSSIILNPSPQRTLQENSVFLAEENAEPSDYRYACLDQSGVAPSSKYQSNLKSLISSLSSDASTNNGFGNRTAGSDQDMVFGLYLCRGDVNSSLCHSCVQDSSRLIQQHCPNNATAVLWYPFCLLRYSNQNFIGNITLRPRIPMFDASQNFTSAGEFDSDARILMNGLIQTGSETNLMFGTHVFNINGTQKRYGWVQCSRDITSEECRTCLSNMLEDVENCCEGKRVWRIFSPSCIVMYETQPFFVNNTGLIAPTYQPGEESSNRSMLIVIIVISVVVVLAVLVFCRIYFRFLRKKKDKQAVKEDGLNPVFSQDQNDEENAMSADLSMMSLKIILETTCNFSDEFKLGKGGFGSVYKGVLPDGKEIAVKRLSKTSGQGLKEFKNEVILIAKLQHRNLVRLLACCIEENEKLLVYEYMPNSSLDFHLFNIERRSKLEWNMRLSIINGIAKGLLYLHEDSRLRVIHRDLKTSNILLDHEMNPKISDFGLARAFGDGQREANTIRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGKKNSGFYLSEHGQSLLIYAWRLWSEGKGLDLMDPILEMSFEPSEVVKYIHIGLLCVQEDAADRPTMSSVVLMLASDSVNLPRPTQPAFSVGRSFMEKESSSNNTTHDSINGVTISEVVAR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1222 691 CDD STKc_IRAK 379 644 - -
Lele29g1222 691 FunFam Uncharacterized protein 449 650 - -
Lele29g1222 691 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Lele29g1222 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Lele29g1222 691 MobiDBLite consensus disorder prediction 669 691 - -
Lele29g1222 691 Pfam Protein tyrosine and serine/threonine kinase 378 642 IPR001245 GO:0004672|GO:0006468
Lele29g1222 691 ProSiteProfiles Gnk2-homologous domain profile. 171 276 IPR002902 -
Lele29g1222 691 Gene3D Transferase(Phosphotransferase) domain 1 449 652 - -
Lele29g1222 691 ProSiteProfiles Protein kinase domain profile. 373 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1222 691 SUPERFAMILY Protein kinase-like (PK-like) 360 666 IPR011009 -
Lele29g1222 691 MobiDBLite consensus disorder prediction 669 683 - -
Lele29g1222 691 FunFam Cysteine-rich receptor-like protein kinase 10 174 276 - -
Lele29g1222 691 ProSiteProfiles Gnk2-homologous domain profile. 61 164 IPR002902 -
Lele29g1222 691 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 686 - -
Lele29g1222 691 SMART serkin_6 373 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1222 691 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 448 - -
Lele29g1222 691 Gene3D Phosphorylase Kinase; domain 1 336 448 - -
Lele29g1222 691 Gene3D - 61 164 IPR038408 -
Lele29g1222 691 Gene3D - 175 276 IPR038408 -
Lele29g1222 691 FunFam Cysteine-rich receptor-like protein kinase 28 63 163 - -
Lele29g1222 691 Pfam Salt stress response/antifungal 181 273 IPR002902 -
Lele29g1222 691 Pfam Salt stress response/antifungal 73 162 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1222 Lele-ChrLele29 15769132 15774574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1222 51 659 Receptor kinase-like Gene Family AT4G05200 40.895 1.40e-171 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele29g1222 PK_Tyr_Ser-Thr 3.7e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1222 29 15769132 15774574 Lele31g0337 31 6975834 6976655 hybridization