Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1220 ATGACTGCCGTGGCGACGACGCCGGATATTTCTGCCAATTCTGTGTCTCCACTGCCACCAGAGAGGTATGACTTCTGCATCCTCCGATACTCTAACAAGAACTTCTTTGGAAACGTGACAACGAGCCCGTGGTGGTATGCTGTTGGATCAAAGAAGATCTCGGGTCTGACGGAGGGGAAGAAAGCGGAGAGTTATGTGAGGAGTTTAATAGAAACGGCAACAGAGGAGACAAAGGAATTGGGTGGAAGGGGAGAGCTTGATTTGGGTGGTGGAAGAAAAAGGTACGCATTGGTACAATGCAGTAGAGACCTTAACACAGAAGGTTGTAGACAATGTTTGGAGGCTATGGTGGAGAAGGTTCCTCAGTGTTGTGAGCAGAAGCTAGGATGGCAGGTTCTGGCTCCAAGTTGTCTAATTAAGTATGATGATTACATGTTTTATCAATCGTCCTCTTCTCCTACAGCCCATAATGGTATTAGCAAGTCAAAAGCCTTGATCATAAGCATAACTGTATTTGTGACCATAGCTATATTAAGTGCGTCTATATTCATCTTCTGGCGGAGGAAGACTAGAAAAGATGATATGCATTTGGAGAGCACTCCTATTTTTCACGACCTTTCTGAAAGAGAGAGTTCATTGAACATAGACCTTCCAACAATCCCTTTACTTGCGATTCAACAGAGTACGAATCAATTTTCAGAAGCATCTAAATTGGGAGAAGGTGGATTTGGTCCCGTATATAAGGGGACATTGCCAGATGGGAGGGAAATTGCTGTTAAAAGACTTTCACAAAGTTCAGGTCAAGGATCAGAAGAATTCAAAAATGAAGTGATATTCATAGCAAAATTGCAACATAGAAACCTTGTCAGACTCTTGGCTTGTTGTATAGAGGAAAATGAAAAGCTACTTATATACGAATATCTACCTAATTCTAGCCTTGATTTCCACCTTTTTAATGAAGAGAATAGACAGAAATTAAATTGGGAAAGAAGGCTAAATATCATTAATGGGATTGCAAGAGGACTTTCATATCTTCATGAAGACTCTCGACTTAGAGTAATTCATAGAGATTTGAAAGCGAGCAATGTTCTTTTGGATCATGAGATGAATCCCAAAATATCAGATTTTGGACTAGCAAGAGCTTTTGAAGGAGCACCAAATCAAGGAATTAATACAGCCAGAGTAATGGGTACATATGGATATATGGCTCCAGAATATGCTATGGAAGGATTATTTTCATTGAAATCAGATGTTTTTAGCTTTGGAGTTCTTCTACTTGAAATCATATGTGGAAGAAGGGTTAGATCTTTCCATTTCTCTAAACATCGTCAAAGTCTTCTAATTTACACATGGAATCTGTGGTGCGAAGGAACATGTTTGGAACTCATGGATCCAATGCTGAAAGATTTGTACATAGAAAATGAAGTTTTGAAGTGCATACACATTGGTTTGCTTTGTGTCCAAGAAGATGCAAAAGATAGACCAACCATGTCCACTGTTCTAGTCATGCTCGCAAGTGACACAATGACCTTTCCCAAACCTAATCATCCTGCATTTTCATTTGGAGGAATGAGCTTAGAAGATTCATCTACATCAAAAAACTCAAAAGATCCTTCCATTAATAAGGTAACAGTGTCTCACATCACACCCAGGTGA 1656 0.3979 MTAVATTPDISANSVSPLPPERYDFCILRYSNKNFFGNVTTSPWWYAVGSKKISGLTEGKKAESYVRSLIETATEETKELGGRGELDLGGGRKRYALVQCSRDLNTEGCRQCLEAMVEKVPQCCEQKLGWQVLAPSCLIKYDDYMFYQSSSSPTAHNGISKSKALIISITVFVTIAILSASIFIFWRRKTRKDDMHLESTPIFHDLSERESSLNIDLPTIPLLAIQQSTNQFSEASKLGEGGFGPVYKGTLPDGREIAVKRLSQSSGQGSEEFKNEVIFIAKLQHRNLVRLLACCIEENEKLLIYEYLPNSSLDFHLFNEENRQKLNWERRLNIINGIARGLSYLHEDSRLRVIHRDLKASNVLLDHEMNPKISDFGLARAFEGAPNQGINTARVMGTYGYMAPEYAMEGLFSLKSDVFSFGVLLLEIICGRRVRSFHFSKHRQSLLIYTWNLWCEGTCLELMDPMLKDLYIENEVLKCIHIGLLCVQEDAKDRPTMSTVLVMLASDTMTFPKPNHPAFSFGGMSLEDSSTSKNSKDPSINKVTVSHITPR 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1220 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Lele29g1220 551 ProSiteProfiles Protein kinase domain profile. 232 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1220 551 Gene3D Transferase(Phosphotransferase) domain 1 308 512 - -
Lele29g1220 551 SUPERFAMILY Protein kinase-like (PK-like) 217 533 IPR011009 -
Lele29g1220 551 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 92 547 - -
Lele29g1220 551 ProSiteProfiles Gnk2-homologous domain profile. 41 146 IPR002902 -
Lele29g1220 551 MobiDBLite consensus disorder prediction 528 551 - -
Lele29g1220 551 Pfam Protein tyrosine and serine/threonine kinase 235 501 IPR001245 GO:0004672|GO:0006468
Lele29g1220 551 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 199 307 - -
Lele29g1220 551 SMART serkin_6 232 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1220 551 Pfam Salt stress response/antifungal 64 144 IPR002902 -
Lele29g1220 551 CDD STKc_IRAK 238 504 - -
Lele29g1220 551 Gene3D - 51 146 IPR038408 -
Lele29g1220 551 Gene3D Phosphorylase Kinase; domain 1 199 307 - -
Lele29g1220 551 FunFam Liguleless narrow1 308 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1220 Lele-ChrLele29 15690396 15696833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1220 23 551 Receptor kinase-like Gene Family AT4G05200 42.124 1.23e-146 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele29g1220 PK_Tyr_Ser-Thr 2.5e-47 CL0016