Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1211 ATGCCGAAGAAGAAGAAGCACAGTGGCAGCGACGAAGAAGAAGACATCTTGTATTACCGCTATTCTTCCGCTTCAGCACCTTCATCAAACCTCACCAGAACCCTGAAAGCACACAGCGGCTCCGGGGGGTTAGCTCCCTCTAAATCTACACTCTACGTCTCCAACATCGACTTCTCCCTAACTAATTCCGATCTCAACACCCTGTTCTCCACCTTCAGAAAGATAGCCCGAGTCACCGTTGTCAAGGACCGAGTCACTAGCCAGAGCCGTGGCGTTTCTTTCATCCAATACGTTTCTCGTGATGATGCACAAAAAGCCGCGCGTGAGATGAGCAGCAAAATCCTCAACGATAGGACCTTGACTGCTTCCATTGCTGCCGGTAACGGCCGAGCTCCGGAATTTATAAAGAAAAGGGTTATATGGATAAGAGTCGGTGTTATGAGTGTGGGGAAGGAGGACATTTGTCTTATGAGTGCCCCAGGATTCAATTGGGGCCCAGGGAGCTTCCGGTTCCCAAGCGCGAACGACGTGGTGGTGGGGGGTGGCTTTGGGGGCCGGTACCGGCTGACTGAGGAGGATGATGACGGATCCGATGGTGGGATCGGGTTGAGGATGATAGTTGGGCTTCTATTGTGGATAATAGGGCGGATGAAAGGTTGCTGA 663 0.5204 MPKKKKHSGSDEEEDILYYRYSSASAPSSNLTRTLKAHSGSGGLAPSKSTLYVSNIDFSLTNSDLNTLFSTFRKIARVTVVKDRVTSQSRGVSFIQYVSRDDAQKAAREMSSKILNDRTLTASIAAGNGRAPEFIKKRVIWIRVGVMSVGKEDICLMSAPGFNWGPGSFRFPSANDVVVGGGFGGRYRLTEEDDDGSDGGIGLRMIVGLLLWIIGRMKGC 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1211 220 SMART rrm1_1 50 123 IPR000504 GO:0003723
Lele29g1211 220 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 51 120 IPR000504 GO:0003723
Lele29g1211 220 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 49 127 IPR000504 GO:0003723
Lele29g1211 220 SUPERFAMILY RNA-binding domain, RBD 46 131 IPR035979 GO:0003676
Lele29g1211 220 Gene3D - 29 141 IPR012677 -
Lele29g1211 220 PANTHER ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1 8 139 IPR044598 GO:0000398|GO:0005689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1211 Lele-ChrLele29 15422284 15422946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1211 31 125 Eukaryotic Initiation Factors Gene Family AT2G23350 28.421 1.15e-06 47.0