Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1205 ATGGGTACATATGGATATATGGCTCCAGAATATGCTATGGAAGGACTATTTTCTGTGAAATCAAATGTTTTTAGTTTTGGAGTTCTTCTACTAGAAATTATATGTGGGAAAAGGATTAGTGGTTTCTATCTCTCTGAACATGGTCAAAGCCTTCTATTTTATGCTTGGAATTTGTGGCGGGAAGGAAAATGTTTGAACCTAATGGACCCAATGCTAGAAGATTCATATACAGCAAATGAAGTTTTGAAGTGCATACATATTGGTTTGCTTTGTGTTCAAGAAGATCCAGCAGATAGGCCAAACATGTCCATTGTTGTTGTCATGCTTACAAGTGACACAATGACATTTCCCAACCCTAATCGTCCTGCGTTTTCAGCTGGAAGAAAGGCGACAGAAGATACATCTACTTCAAAAAATTCTAAGGATGCTTCTATTAATGAGATAACATTGTCTCACATCAAACCTAGGTGA 471 0.3715 MGTYGYMAPEYAMEGLFSVKSNVFSFGVLLLEIICGKRISGFYLSEHGQSLLFYAWNLWREGKCLNLMDPMLEDSYTANEVLKCIHIGLLCVQEDPADRPNMSIVVVMLTSDTMTFPNPNRPAFSAGRKATEDTSTSKNSKDASINEITLSHIKPR 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1205 156 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1205 156 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 154 - -
Lele29g1205 156 MobiDBLite consensus disorder prediction 118 146 - -
Lele29g1205 156 Pfam Protein tyrosine and serine/threonine kinase 5 107 IPR001245 GO:0004672|GO:0006468
Lele29g1205 156 Gene3D Transferase(Phosphotransferase) domain 1 1 122 - -
Lele29g1205 156 MobiDBLite consensus disorder prediction 129 146 - -
Lele29g1205 156 Pfam Domain of unknown function (DUF3403) 111 156 IPR021820 GO:0004674
Lele29g1205 156 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 114 - -
Lele29g1205 156 SUPERFAMILY Protein kinase-like (PK-like) 1 137 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1205 Lele-ChrLele29 14835312 14836257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1205 1 156 Receptor kinase-like Gene Family AT4G23150 49.689 1.01e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele29g1205 PK_Tyr_Ser-Thr 4.3e-08 CL0016