Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1203 ATGCCATTCCTTCCTTTCTTCTCTTCTCTTTTCTTTCTCTTCTTCCTCTTCTTCACACCGCCATTATTGCTCCTAGCTCAACCTTCTTCTCCTCCTCCTCCTCCGTTTCCTGCTTCTCCCTCTGAGTCCTGCAAGTCCACATTATACCCAAAACTTTGTCGTTCCATTCTCTCAGCCATTCGCTACTCACCGTCAGATCCTTACTCACTTGGCAAATTCTCAATCAAGCAAAGTCTTAAACAAGTCAAGAGACTCGTCAAAGTGTTCAACAAATTCCTCAAAAAGAAAAATGGTTCCTCTTCTTCTCTGAACCGCGACGAGATTGCGGCTTTGGTTGACTGTATGGAGCTGAACCAGCTCAACGTAGATTACTTGGAGTCCGTCAAGTCAACGCTGAAGTTGGTGGAGGCATCGAGCCCGGAGCTGGTGGAGGAGATCCAGACGCATCTCAGCGCGGTGGTGACCAACCAAGACACTTGTTACGACGGTTTGGTGGCGGCTCAGAGCGGTATTGCTAAGGCACTGAGCGTGCCGATGAACAATACGAACCAGTTATATAGTGTTTCGCTAGGGTTGGTCACTCATGCTTTGAACAGATATATGAAGAAGCAGAAGGTTGGCAAACATGGCCTTCCCAGCCAGGCTAACAAAGTCAGACAGCCACTTGAGAAGCTTGTGAAGCTTCTTCGGGGAAAGTATGGTTGCGAGGAGTCATCGAATTGCAACAGGAAGGAAAGGATTATGCAAGAAAGCCAAGAGAAAGGGATTTTGTTGAATGAGTTCGTTGTCGTGAGCCCTTCTGATTCCGACAATTTCACGTCGATCGGAGATGCCATTGCAGCCGCTCCGAGCTACACAAACCCTCAGGATGGCTACTTCCTCATATACGCAAAAGAGGGATACTACGAGGAATACGTTGTGGTTCCTAGTGACAAGAGGAATGTATTGCTCATTGGTGATGGCATTGGTCGAACTGTCATTACAGGCAATCACAATGTTGTTGATGGTTGGACTACTTACAATTCTTCCACATTTGCTGTGTCTGGACAACGATTCGTAGCAGTGGATGTTACATTCAGGAACACAGCAGGCCCAGAGAAGCACCAAGCAGTGGCAGTGAGGAACAACGCCGACCTCTCCATTTTCTACCGTTAGTGGAATGGTACATTAGGGTTAGATACTTTGTTTTATGGTGAGTTTGGTAATTATGGACCTGGGGCTAATACAGGTAAGAGAGTTCAATGGGGAGGGTATTCTGTTTTGAATGCTGAACAAGCTTTTAATTTTACTGTGTCTAAGTTTACTTTGGGAGAGACTTGGATTCCTTATGCGGATATACCTTTCAATGGAGGATTGTCGGGTTAA 1365 0.4623 MPFLPFFSSLFFLFFLFFTPPLLLLAQPSSPPPPPFPASPSESCKSTLYPKLCRSILSAIRYSPSDPYSLGKFSIKQSLKQVKRLVKVFNKFLKKKNGSSSSLNRDEIAALVDCMELNQLNVDYLESVKSTLKLVEASSPELVEEIQTHLSAVVTNQDTCYDGLVAAQSGIAKALSVPMNNTNQLYSVSLGLVTHALNRYMKKQKVGKHGLPSQANKVRQPLEKLVKLLRGKYGCEESSNCNRKERIMQESQEKGILLNEFVVVSPSDSDNFTSIGDAIAAAPSYTNPQDGYFLIYAKEGYYEEYVVVPSDKRNVLLIGDGIGRTVITGNHNVVDGWTTYNSSTFAVSGQRFVAVDVTFRNTAGPEKHQAVAVRNNADLSIFYRXWNGTLGLDTLFYGEFGNYGPGANTGKRVQWGGYSVLNAEQAFNFTVSKFTLGETWIPYADIPFNGGLSG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1203 454 SMART PMEI_2 35 192 IPR006501 GO:0004857
Lele29g1203 454 CDD PMEI-like_3 44 195 - -
Lele29g1203 454 Pfam Plant invertase/pectin methylesterase inhibitor 41 191 IPR006501 GO:0004857
Lele29g1203 454 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 196 IPR035513 -
Lele29g1203 454 Gene3D - 258 384 IPR012334 -
Lele29g1203 454 PANTHER PECTINESTERASE 386 442 - -
Lele29g1203 454 Pfam Pectinesterase 262 384 IPR000070 GO:0030599|GO:0042545
Lele29g1203 454 Gene3D - 385 454 IPR012334 -
Lele29g1203 454 SUPERFAMILY Pectin lyase-like 260 450 IPR011050 -
Lele29g1203 454 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 195 IPR035513 -
Lele29g1203 454 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 195 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1203 Lele-ChrLele29 14458377 14463081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1203 386 452 Carbohydrate Esterase AT3G10720 65.672 5.07e-26 109