Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1195 ATGTCCTACAAACAATTTATTCAAGAGCTTGAGGATGACATATTACCATCTGAAGCAGAGCGTAGGAATGTTCTGCAAAGAATATCATCCTCTGCACAGTTGCGTGACAAATATCATCCAACAAATTTGGTTGCAGTCATTGATAGAAATCCTGGCTTAAATACTTCATCTTCCAAACCAGGGAAAGCAAGTGAGCCAAATTCAGAGGAGGAAGCAGATGCTGGTGGTAAACGAAGGAAGCATGGTAGGCGACCTAATAAAGAAAATGATTTCTCAGCTGCTCCGAAGGCTCACCCAATAAGTTCTGAATCTAGACGAATACAAGCAGATGTTGAACAGGCTCAAGCCCTTGTATGTAAGCTTGATGCAGAAAAGGGGATTGAAGATAATATTTTATGCAGCAGTAATCACAACAAAAACGAAGATAAGTCTCGCAGTGGATCTGTTGGTACCATAATAATAGTACGGGGCTTAACATCTGTTAAGGGATTAGAGGGCGTTGAGCTCCTGGATACATTTCTTACTTATCTTTGGCGGATTCATGGGGTTGATTATTATGGTATGATTGAGACTAATGAGCCCAAGGGTCTTAGGCATGTGAGGCCAGAAATAACAGGTCACGAAGAATCAAGTAAATCAGGGTCTGAATGGGGAAAAAAACTTGATTCATTCTGGCAAGGAAGGTTGAGTGGTCAGGATCCTTTGGAAATAATGACTGCTAAGGAGAAGATTGATGCTGCAGCAGTTGAAGTGTTAGATCCATATGTTAGAAAAATCAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCCAAGGGCTGTACAAAGCTTTTCCATGCTGCTGAATTTGTGCATAAACATCTTAAATTAAAACACATAGAGCTTGTAAATGAGTTAACTTCGAAAGTGCGCGAGGATCTCTATTTTCAAAACTACATGAAGGACAAACCCCTAAGACGCAGATTACCTCTAGAAGGAAGATTGAGAGATGATCGTGGCAACCGGCGAGACCATGAACGAAGTGACACAATGAATGATAGTGACATGCCTGATAACTCCCCATCTCATGATAAGGGAAATCATGATGAGACTATGTATGATTCATATGCTGGAGCTGCTGCTCCTCCATTTACCTCAGATATGCCACCTCCTCCACCAGTGTTGATGCCTGTACCTGGTGCTGGGCCATTGGGACCCTTTGTTCCAGCTCCCCCCGAAGTTGCTATGCAGATGTTAAGAGAGCAAGGAGGAGCATCTTCGTACGATGCCTCAGGAAGGAAGATGCGGTCCGGCCCTCATACGGGGGGACCAGCACCAATAATTGCTGTTCCCCCAGCTTTTAGACCTGATCCTCGTCAGATGCGAAGTTATCAAGATCTGGATGCTCCGGAAGATGAAGTCACCGTGATAGACTATCGGAGTTTGTAG 1431 0.4368 MSYKQFIQELEDDILPSEAERRNVLQRISSSAQLRDKYHPTNLVAVIDRNPGLNTSSSKPGKASEPNSEEEADAGGKRRKHGRRPNKENDFSAAPKAHPISSESRRIQADVEQAQALVCKLDAEKGIEDNILCSSNHNKNEDKSRSGSVGTIIIVRGLTSVKGLEGVELLDTFLTYLWRIHGVDYYGMIETNEPKGLRHVRPEITGHEESSKSGSEWGKKLDSFWQGRLSGQDPLEIMTAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHIELVNELTSKVREDLYFQNYMKDKPLRRRLPLEGRLRDDRGNRRDHERSDTMNDSDMPDNSPSHDKGNHDETMYDSYAGAAAPPFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGASSYDASGRKMRSGPHTGGPAPIIAVPPAFRPDPRQMRSYQDLDAPEDEVTVIDYRSL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1195 476 MobiDBLite consensus disorder prediction 324 365 - -
Lele29g1195 476 MobiDBLite consensus disorder prediction 48 63 - -
Lele29g1195 476 MobiDBLite consensus disorder prediction 324 375 - -
Lele29g1195 476 PANTHER ARSENITE-RESISTANCE PROTEIN 2 46 474 IPR039727 GO:0006397
Lele29g1195 476 MobiDBLite consensus disorder prediction 64 78 - -
Lele29g1195 476 MobiDBLite consensus disorder prediction 48 104 - -
Lele29g1195 476 ProSitePatterns Zinc finger C2H2 type domain signature. 270 293 IPR013087 -
Lele29g1195 476 MobiDBLite consensus disorder prediction 417 463 - -
Lele29g1195 476 Pfam Arsenite-resistance protein 2 210 368 IPR007042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1195 Lele-ChrLele29 14128380 14131531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1195 1 476 C2H2 Transcription Factor Family AT2G27100 56.273 6.46e-180 520
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1195 29 14128380 14131531 Lele31g0366 31 10895473 10910438 hybridization