Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1186 ATGGAGTTGGATAATCCAGTGGATGATTTGGAAAATTTTGAACCCGCTGTTAATTCACCGTCAGTCAGAAGCTCCATGTCTATTCAGTCGAGGGGCTCTAATAGGAATTCAACTCGAGAAGTAAATTTCGGGCATTCGGGTGTCAAGCATGAGAGGGATGAGTCGAAGGGGGCAGATTCTGAAGCATTCAGCATGTCCCAGAAGGAAATCAGCGATGCAGATGCAAGGTTAGTGTATATAAATGATCCTGTGAGGACGAATGAGAGGGTTCGACTTTCAGGAAATTCGATTCGCACTGCGAAATACTCCATCATCACCTTTTTGCCGAAGAATTTATTTGAACAATTCCATAGAGTTGCTTACATTTATTTTCTTATAATTGCCATACTTAATCAGCTCCCTCAGATTGCCGTTTTTGGGATTGGGGTTTCTTTTTTGCCGTTAACCTTTGTCCTGGTAGTTTCGGCCGTGAAGGATGCATATGAGGACTGGAGGCGACATCAGTCGGACAAAATTGAGAACAACAGGTTAGCATCAGTTGTGGTTGATGATAATTTCCAAAAGAAAAAATATAAGGACATTAGAGTTGGTGAAATCGTTAAAATACATGCAAATGAAACCATTCCCTGTGATATGGTACTGCTGTCAACCAGTGAGCCTACGGGAGTTGCATATATTCAGACTGCTAATTTAGATGGAGAGTCAAATTTGAAAACTCGGTATGCAAAACCTGAGACCCTATCACTGTTGCCTGAGAAGGAGAGGTTTAATGGGTTAATTAAGTGTGAGAAACCCAATAGGAACATTTATGGGTTTCAGGGTAGCATGGAAATTGATGGAAAGCGATCCTCACTTGGATCATTCAATATTGTCCTCCGAGGCTGTGAAATCAAGAATACGAATTGGGCAGTTGGTGTTGCTGTATATTGTGGCCAAGAAACTAAAGCCATGCTCAATAGCTCTGGGGCTCCGTCAAAGAGGAGTCGGCTGGAGACTCGTATGAACAAGGAGATCATCTTGATCTCTTGCTTTCTTGTAACTTTGTGTACAGTTATCTCTGTTTGCACTGCTGTTTGGTTAAAGCGCTACAAAGATGAATTGAATGTCTTGCCCTATTATCGAAAACTGGATGTTTCAAGTGGAAAAGCAAAAAGCTACAAATATTCCGGATGGGGATTGGAAATACTGATTGCATTCCTCATGTCAGTTATAGTGTTCCAGGTCATGATTCCAATATCATTGTATATTTCCATGGAGCTTGTCCGGATTGGTCAGGCATACTTCATGACCAGAGACACTAAACTATATGATGAGGCATCAAATTCCAGATTTCAGTGTAGAGCTTTAAATATAAATGAAGACTTGGGACAAATTAAATATATTTTCTCGGACAAAACTGGCACACTTACTGAGAACAAGATGGAATTTCAATGTGCAAGCATCTGGGGGCTTGATTACAGCTCGCAAAATGCCGATCAGGGGAATGAACCTGTCCAAGTTGATGGAAAGATTTTGAGGCCTAAGGTGAAGGTGAAAGTTGATCCAGAGCTTTTGCAATTAACAAGAGGTGGATTCAAAAACAAGGAGGCAAAACATGTTTGTGAATTCTTTCTTGTGTTGGCAGCCTGCAACACAATTGTGCCTCTTCTTGTTGATACATCTGATCCTGCAGTCAAATTGATTGATTATCAAGGGGAGTCACCAGATGAACAAGCATTGGTATATGGTGCCGCAGCATATGGTTTTACACTAATAGAACGAACTTCAGGCTATATAGTTATTGATATTCAAGGAGAAAGACAAAAGTTCAAAGTCTTGGGTTTGCATGAATTTGATAGTGACCGGAAGAGGATGTCTGTTATATTGGGGCTCCCTGACAATTCTGTGAAAGCTTTTGTCAAAGGTGCTGATACATCAATGTTTAGTGTGATAGATAAATCACTGAGTATGGATATAATACGTGCAACTGAAAACCAACTTCACTCTTATTCCTCCCTTGGTTTGAGAACCCTTGTTATTGGGAAGCGGGAATTAAATCCTTCAGAATTTGAACAATGGCACTTTGCCTTCGAGGAAGCAAGCAATGCTCTGATTGGTAGGGCTGCTTTGCTTCGCAAGGTTTCCAGCAGTGTAGAAAACAATCTCTGCATATTGGGTGCATCTGCTATTGAAGATAAGCTGCAGCAAGGGGTGCCTGAATCCATTGAATCTCTAAGGACAGCAGGTATCAAGGTATGGGTGTTGACTGGTGACAAACAAGAAACTGCCATATCAATTGCTTACTCCTCAAAGCTCCTAACAGGCGATATGACTCAAATTGTAATTAATAGCAACAGTAGAGAGTCATGTAGCAGGAATTTGCATGATGCCCTTGTCATGTCTAACAAACTCATGACCCTGTCTTGGGGTGCGAACAATACTGGAGGAAGTATTGAACTTGTAACAACTCAAATAGCATTAATCATTGATGGTACCAGCCTTGTATACATTCTTGAAAGTGAAAACAGCGAACTCGAAGAACAGCTCTTTCAACTGGCGTGTAAATGTTCTGCAGTTCTCTGTTGTCGTGTGGCTCCACTACAGAAGTCTGGGATTGTTTCCCTTGTGAAGAAGAGGACCTCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTGGGCATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCATCGGATTATGCAATGGGACAATTTAGGTTTCTAGTTCCTCTCTTATTGGTTCATGGCCATTGGAATTATCAACGGCTGGGTTACATGGTGCTATACAATTTGTACAGGAACGCTATCATTGTTCTTGTCCTGTTTTGGTATGTGCTGTTCACTGCCTTCACTTTGACAACTGCTATTACTGAATGGAGCAGCTTGCTATATTCCGTAGTTTACACTTCATTCCCAACTATTGTTGTTGGTATTCTTGACAAAGATCTTAGTAAAAGGACTCTTCTGAAGTATCCTCAGCTTTATGGAGCAGGGCAGAGAAATGAGGCCTACAATGAACATTTATTTTGGTTGACAATGGCTGATACTTTGTGGCAAAGTATTGTAGTGTTCTTTGTTCCTCTCTTTGCCTACTGGGGAAGCACTGTCGATATATCAAGCATTGGAGATCTTTGGACTCTTTCAGTGGTTATTTTGGTTAATTTACACTTGGCTATGGATGTCATAAGGTGGACTTGGATTACTCATGCAGCCATTTGGGGTTCTGTTATTGCAACCTTCATTTCTGTCATGATCATAGATGCTATACCCACATTTCCTGGTTACTGGGCCATCTTTCATATTGCTGGAACACGTGTCTTCTGGTTATGTTTGCTCGGATCTATTGTAGGAGCTTTGCTTCCTCATTTTGTTGTAAAATTTGTGCATCAGTATTATTTTCCTGACGATATTCAAATTTCAAGAGAAGCTGAAAAGAAGTCTGTGAATACAAGAGTTGTTGTTGGTGGTGGCCAGATAGAAATGCATACTATTGCAGATGATCCAACTAGATAA 3552 0.411 MELDNPVDDLENFEPAVNSPSVRSSMSIQSRGSNRNSTREVNFGHSGVKHERDESKGADSEAFSMSQKEISDADARLVYINDPVRTNERVRLSGNSIRTAKYSIITFLPKNLFEQFHRVAYIYFLIIAILNQLPQIAVFGIGVSFLPLTFVLVVSAVKDAYEDWRRHQSDKIENNRLASVVVDDNFQKKKYKDIRVGEIVKIHANETIPCDMVLLSTSEPTGVAYIQTANLDGESNLKTRYAKPETLSLLPEKERFNGLIKCEKPNRNIYGFQGSMEIDGKRSSLGSFNIVLRGCEIKNTNWAVGVAVYCGQETKAMLNSSGAPSKRSRLETRMNKEIILISCFLVTLCTVISVCTAVWLKRYKDELNVLPYYRKLDVSSGKAKSYKYSGWGLEILIAFLMSVIVFQVMIPISLYISMELVRIGQAYFMTRDTKLYDEASNSRFQCRALNINEDLGQIKYIFSDKTGTLTENKMEFQCASIWGLDYSSQNADQGNEPVQVDGKILRPKVKVKVDPELLQLTRGGFKNKEAKHVCEFFLVLAACNTIVPLLVDTSDPAVKLIDYQGESPDEQALVYGAAAYGFTLIERTSGYIVIDIQGERQKFKVLGLHEFDSDRKRMSVILGLPDNSVKAFVKGADTSMFSVIDKSLSMDIIRATENQLHSYSSLGLRTLVIGKRELNPSEFEQWHFAFEEASNALIGRAALLRKVSSSVENNLCILGASAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIAYSSKLLTGDMTQIVINSNSRESCSRNLHDALVMSNKLMTLSWGANNTGGSIELVTTQIALIIDGTSLVYILESENSELEEQLFQLACKCSAVLCCRVAPLQKSGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDYAMGQFRFLVPLLLVHGHWNYQRLGYMVLYNLYRNAIIVLVLFWYVLFTAFTLTTAITEWSSLLYSVVYTSFPTIVVGILDKDLSKRTLLKYPQLYGAGQRNEAYNEHLFWLTMADTLWQSIVVFFVPLFAYWGSTVDISSIGDLWTLSVVILVNLHLAMDVIRWTWITHAAIWGSVIATFISVMIIDAIPTFPGYWAIFHIAGTRVFWLCLLGSIVGALLPHFVVKFVHQYYFPDDIQISREAEKKSVNTRVVVGGGQIEMHTIADDPTR 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1186 1183 Gene3D - 563 692 IPR023299 GO:0000166
Lele29g1186 1183 Pfam E1-E2 ATPase 178 419 - -
Lele29g1186 1183 Pfam Cation transport ATPase (P-type) 566 641 - -
Lele29g1186 1183 PRINTS P-type cation-transporting ATPase superfamily signature 462 476 - -
Lele29g1186 1183 PRINTS P-type cation-transporting ATPase superfamily signature 880 899 - -
Lele29g1186 1183 PRINTS P-type cation-transporting ATPase superfamily signature 759 769 - -
Lele29g1186 1183 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 64 1158 - -
Lele29g1186 1183 SUPERFAMILY Calcium ATPase, transmembrane domain M 95 1147 IPR023298 -
Lele29g1186 1183 ProSitePatterns E1-E2 ATPases phosphorylation site. 464 470 IPR018303 -
Lele29g1186 1183 SFLD Haloacid Dehalogenase 446 931 - -
Lele29g1186 1183 SUPERFAMILY Calcium ATPase, transduction domain A 175 316 IPR008250 -
Lele29g1186 1183 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 143 245 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele29g1186 1183 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 852 967 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele29g1186 1183 FunFam Phospholipid-transporting ATPase 562 695 - -
Lele29g1186 1183 SUPERFAMILY HAD-like 457 926 IPR036412 -
Lele29g1186 1183 FunFam Phospholipid-transporting ATPase 717 920 - -
Lele29g1186 1183 SFLD p-type atpase 446 931 IPR044492 -
Lele29g1186 1183 PRINTS Sodium/potassium-transporting ATPase signature 957 977 - -
Lele29g1186 1183 PRINTS Sodium/potassium-transporting ATPase signature 455 476 - -
Lele29g1186 1183 Gene3D - 714 920 IPR023214 -
Lele29g1186 1183 FunFam Phospholipid-transporting ATPase 150 319 - -
Lele29g1186 1183 MobiDBLite consensus disorder prediction 17 43 - -
Lele29g1186 1183 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 94 1154 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele29g1186 1183 Gene3D - 152 320 - -
Lele29g1186 1183 MobiDBLite consensus disorder prediction 1 61 - -
Lele29g1186 1183 Pfam Phospholipid-translocating ATPase N-terminal 78 140 IPR032631 -
Lele29g1186 1183 MobiDBLite consensus disorder prediction 44 59 - -
Lele29g1186 1183 CDD P-type_ATPase_APLT_Dnf-like 94 1040 - -
Lele29g1186 1183 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 468 730 IPR023299 GO:0000166
Lele29g1186 1183 Pfam Phospholipid-translocating P-type ATPase C-terminal 908 1147 IPR032630 -
Lele29g1186 1183 FunFam Phospholipid-transporting ATPase IC 459 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1186 Lele-ChrLele29 13918773 13928417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1186 26 1183 Primary Pumps ATPases AT5G04930 67.955 0.0 1654