Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1157 ATGGGTGCCAGTCTTCCTGCTTATAGGACTTTTGCTTTGGATGAACTCAAGGAGGCTACAAACAATTTTGATGCATCATGTTTTATAAGTGAAGGTGCACGTGGTCAGCATGATTTATGCTTGAAAGTGTATTTGCTTGGAAAGATATCTTTGGAATGGGATAAGGTTTATATGGACTATCTTAGAGCTTTGAAATATGATGTGCTTCAACTATGGTGTCAGATCTACAAAGGGTCGCTCTCTGATGGAATTCAGATTGCTATCAGAAGTTTGAAAATGAAGAAAAGACATGGCCCTCAGAACTATATGCATCGTATTGAATTGATTTCAAAACTGAGGCATCCACACTTGGTCAGTGCTCTAGGACATTGCTTTGAGGGAAACCACGAGGATCCAAGTGTCAACAGTATATATCTCATATTTGAGTTTGCGCCATACAAAAGTTTAAGAGGCAGCATATCTGACTTAATTTCACCTTTAAGGAAATCAAAATTTTCTCTTAATACTTATGAAGCTGTTGAAACTGCCAATAGTGAGCATAACGCTGCTGGATCTTCTGGAGAAAAGCTTTCCTGGGCACAGAGAATAGCATCTGCAATTGGAGTTGTTAAAGGCATTCAATTTTTGCACACTGGGATAGTGCCTGGAATGTACGAAATAGAACTTTATCCCCTGCAGTTAAAGGAAATGTTCAAGCAAGTTGGAACATTAAAAGATCTCTTACAAGTAAGCCTAGCAACTGATGAAATAGCTAGAAGGAGCATTGTTGATCCAGTAATTCACAAGCAATGTTCAGATGAATCAATGAAGAGAGTGATGGAGTTATGTGTGAGATGTGTCTCAGAAGATCCTACTGATAGGCCTTCTGTAGAAGATGCTCTCTGGAATCTGCAGTTTGCAGCACAGGTTCAGAATTCATGGGGAAGAGACTCCATTGATACAAGAGAGTCGCCTGCTTCCCCTGCGCAAGAAACACAAGGTTCCTAA 987 0.4002 MGASLPAYRTFALDELKEATNNFDASCFISEGARGQHDLCLKVYLLGKISLEWDKVYMDYLRALKYDVLQLWCQIYKGSLSDGIQIAIRSLKMKKRHGPQNYMHRIELISKLRHPHLVSALGHCFEGNHEDPSVNSIYLIFEFAPYKSLRGSISDLISPLRKSKFSLNTYEAVETANSEHNAAGSSGEKLSWAQRIASAIGVVKGIQFLHTGIVPGMYEIELYPLQLKEMFKQVGTLKDLLQVSLATDEIARRSIVDPVIHKQCSDESMKRVMELCVRCVSEDPTDRPSVEDALWNLQFAAQVQNSWGRDSIDTRESPASPAQETQGS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1157 328 Gene3D Phosphorylase Kinase; domain 1 72 144 - -
Lele29g1157 328 ProSiteProfiles Protein kinase domain profile. 23 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1157 328 MobiDBLite consensus disorder prediction 308 328 - -
Lele29g1157 328 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 252 310 - -
Lele29g1157 328 SUPERFAMILY Protein kinase-like (PK-like) 10 211 IPR011009 -
Lele29g1157 328 Pfam Protein tyrosine and serine/threonine kinase 74 211 IPR001245 GO:0004672|GO:0006468
Lele29g1157 328 Gene3D Transferase(Phosphotransferase) domain 1 223 312 - -
Lele29g1157 328 SMART tyrkin_6 73 297 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1157 Lele-ChrLele29 13397756 13407300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1157 2 311 Miscellaneous Gene Families AT3G03770 35.925 3.19e-59 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele29g1157 PK_Tyr_Ser-Thr 3.6e-08 CL0016