Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1152 ATGGCTGAAGAGCCCCAGAAAGCAGTTAAGGAAGTGGCGGCGGTGGTGGCTGAGAAATCTGTTGTTGAAGAGAAAGAACCCGAGAAGCCTGTCATCGAAGCAGAGCCCGAGAAGCCCGTCGTTGAGAGCGAGAAAAAAGATGAACAGAAGCAGGCGGGGCCCACTGAGGAATTTGCCGTCGAGGAGGAGAAGCCTAAGGCACCAGTAGAAGAAAGCAAGATAACGCAGTCTGTTTCTTTCAAGGAGGAGACCTATGTAGTCGCCGAGCTCCCTGAAGCTCAGAAGAAAGCCCTTGATGATCTGAAACAGCTTATTCAAGAAGCACTGAACAAGCACGAGTTCACTGCTCCTCCTCCTCCGCCGCCGCTAGCGGCCGCTAAGGAGGAGGAAGAGAAGAAGGCGCCGGAGGTGGTGACAACGGAGGAGAAACCGGCGGAAGCTGAAGAAAAAACTGAAGCAGATCCTCCTAAGGAGGTTGCTGTTGCTGAAGAGCCAGCTAAGGTTGAGGTTGAAGCCGTTACTGAAGAGAAAAAGGAGGAGGAGAAGCCTGTGCCTGAAGCTCCGGGAGTCGCCGAGGTGGTTGAAACTGTCACTGAAGAGAAAAAGGAGGAGGAGCCTAAACCTGAGGCCGCCGCCGCCACAGAGGTGGTTGAAAAAGTTTCTATTGAAGTACAGGATGAATCTAAGACGGTGGAAACAATCAAAGAGACTATAGTTTCAGTCTCTGAGGAGGCAGCACCTGCAACTAAGGATGGTGAGGTTGCTGTTCCGGCACCGGAGGCGGTGGTGCCAGAAACGAAAGTGGAGGAGGATGTCACTGCGCCACCTCCGCCTCCACCGGAGGAGGTTTCAATCTGGGGAATTCCCCTGCTTGCGGATGAGAGGAGTGATGTGATACTCCTGAAATTCTTGAGAGCAAGGGATTTCAAGGTGAAGGACGCCTTCACGATGATCAAGAACACCGTTCGTTGGCGAAAGGAATTCGGAATCGACGCCCTCGTTGACGAAGATCTCGGGAACGATTGGGACAAGGTGGCGTTCACTCATGGATATGACAAAGAAGGCCATCAAGTTTGCTACAACGTGTTTGGTGAGTTGAACAAGGAGTTGTACCAGAACACGTTTTCTGATGAAGAGAAACGCCAGAAGTTCATCAGATGGAGAATTCAGTTCTTGGAGAAGAGCGTTAGAAAATTTGACTACTCTCCAACTGGTATCTCTACAATTGTTCAGGTCAATGATCTTAGGAATTCACCTGGATTGGGTAAGAGGGAACTCAGGCAAGCAACCAATCAGGCCCTTCAATTGCTTCAGGATAACTATCCTGAGTTCTTAGCCAAGCAGGTGTTTATCAATGTTCCATGGTGGTACCTGGCCTTCTCAAGGATGATCAGTCCATTCCTGACTCAGAGGACCAAAAGCAAATTTGTATTTGCTGGTTCATCCAAATCTGCTGAAACCCTTTTCAAATATATAGCTCCTGAGCAAGTGCCTGTCCAGTATGGTGGATTAAGCAGGGAGGGTGACTATGAATTCACAACTGCGGAATCTGTTACTGAGTTTACCATTAAACCATCAACAGAACATATTATAGAATTCCCAGCTTCTGAGCCGTGCCATCTGGTTTGGGAACTAAGAGTTGTGGGTTGGGAAGTGAGTTATGGTGCTGAATTCACGCCCAGTGCCGAAAACAAATATACCGTGATAGTGCAGAAGAGCCGGAAAATTGGGGTTGCAGACGAAACCATAATATCTAATGACTTCAAAATTGGGGAACCCGGTAAGGTTGTGCTCACCATTGATAACCAGACATCAAAGAAGAAGAAATTGCTCTACAGGTCCAAGACCAAACCCATCTCGGAGTGA 1866 0.4882 MAEEPQKAVKEVAAVVAEKSVVEEKEPEKPVIEAEPEKPVVESEKKDEQKQAGPTEEFAVEEEKPKAPVEESKITQSVSFKEETYVVAELPEAQKKALDDLKQLIQEALNKHEFTAPPPPPPLAAAKEEEEKKAPEVVTTEEKPAEAEEKTEADPPKEVAVAEEPAKVEVEAVTEEKKEEEKPVPEAPGVAEVVETVTEEKKEEEPKPEAAAATEVVEKVSIEVQDESKTVETIKETIVSVSEEAAPATKDGEVAVPAPEAVVPETKVEEDVTAPPPPPPEEVSIWGIPLLADERSDVILLKFLRARDFKVKDAFTMIKNTVRWRKEFGIDALVDEDLGNDWDKVAFTHGYDKEGHQVCYNVFGELNKELYQNTFSDEEKRQKFIRWRIQFLEKSVRKFDYSPTGISTIVQVNDLRNSPGLGKRELRQATNQALQLLQDNYPEFLAKQVFINVPWWYLAFSRMISPFLTQRTKSKFVFAGSSKSAETLFKYIAPEQVPVQYGGLSREGDYEFTTAESVTEFTIKPSTEHIIEFPASEPCHLVWELRVVGWEVSYGAEFTPSAENKYTVIVQKSRKIGVADETIISNDFKIGEPGKVVLTIDNQTSKKKKLLYRSKTKPISE 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1152 621 Gene3D - 344 520 IPR036865 -
Lele29g1152 621 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 335 509 IPR001251 -
Lele29g1152 621 SUPERFAMILY CRAL/TRIO N-terminal domain 87 337 IPR036273 -
Lele29g1152 621 PANTHER PATELLIN-1 179 618 IPR044834 GO:0008289
Lele29g1152 621 Pfam CRAL/TRIO, N-terminal domain 281 320 IPR011074 -
Lele29g1152 621 Gene3D GOLD domain 521 616 - -
Lele29g1152 621 ProSiteProfiles GOLD domain profile. 511 616 IPR009038 -
Lele29g1152 621 Gene3D - 279 327 - -
Lele29g1152 621 MobiDBLite consensus disorder prediction 19 76 - -
Lele29g1152 621 MobiDBLite consensus disorder prediction 125 186 - -
Lele29g1152 621 SUPERFAMILY CRAL/TRIO domain 346 506 IPR036865 -
Lele29g1152 621 SMART CRAL_TRIO_N_2 296 321 IPR011074 -
Lele29g1152 621 PRINTS Cellular retinaldehyde-binding protein signature 299 321 - -
Lele29g1152 621 PRINTS Cellular retinaldehyde-binding protein signature 461 480 - -
Lele29g1152 621 CDD SEC14 340 504 IPR001251 -
Lele29g1152 621 MobiDBLite consensus disorder prediction 112 191 - -
Lele29g1152 621 SMART sec14_4 340 506 IPR001251 -
Lele29g1152 621 MobiDBLite consensus disorder prediction 19 70 - -
Lele29g1152 621 Pfam CRAL/TRIO domain 344 503 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1152 Lele-ChrLele29 13333212 13337176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1152 300 498 Acyl Lipid Metabolism Gene Families AT1G55840 28.972 3.03e-07 50.8