Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1099 ATGGATGCCTCATCCAGTACAGGTGAGATTGTGGAATCAAGAGAAGAGATTATTTCTGAGTTTAGAATGGATGAAAAAGCTGAGAGTAGTTGTGCCCACAGATCAGGGAAAAAGTATTCTGTAGAGGATGATATTGATCGTCTCTTCCAAGCTATTGACTTCAAAAATTCAGCTAGAGGTTCTAGTACACCACGTTCTCAAAAGAGTGCACTTAAAAGGCCAATAAGAGTCTGTTCATCTCTGGCATCAGGAATTGGGATTGCAGAGCCTGTAAGTTTAAAGCAGGCACTTAGAGGACTTTGCATATCTCAGGCATCAGAGATGGCTGCTTTGAAGCGACTTTCAAAGCCATCCAGTTCTTCTAGAGCATCTGAGGCAGGAACTATTAAGAAGCTGTATACAGCAGTGGTAGATGAGGGGAAAGGAAACTTGGTGGAAATCTCCATTGTGCCTGAGATATCTGTGCCTTCTGGTAAAATGCCTAGGGAAGATAAGTCAAGTACAAGTGCTGATCATTCTACTAATTTTGTTGATGTAACAAACCCAAAACCAGTCACAACCAGGGTAGCATCCCGGGATCAGATTTTACCTCTTCAATCAGAAGGTGAGAGTGAGAAGTTAGATGCAGTTGCTGGAAAACCGGTACTTCCAAATCCATCCAGAGTTGATTTTGAAGGTGAGGAAATGTCTGAGGTCAAGATTGTTCCTGCTTCCTCAAGCAAAGCTTCCCACTGTTCTACAATGCTAGATAAGGGGCAGGAAGTAGAGTTACATTCTGAAGCTAATCAACCAAGCTCTAGTACAAGTAGTGGAGTGGAGAAATGCTCAAGCAGTACTATATGTTTGTCAAAGCCAATGTTCAGGAACATGAGCTTCCTTAGGAAAAAAGTAAAGCAAGAATTATGTTCTACCTCAAGTGGCACCACACTATGTACCCGGAAAGTTGACAGTGACTTGGATCCTAGTACAAGTAATTTGAACAAGGAGACTGATAAATATAATTTGAAGCAGGAAATGAAAGAAAATGATAAATTGTCTCCCTGCAGTTCAAATCGTAGTGTTGAAGTAAATTCAAATAATGTGGGTGCAGATTCAATCAAAACTGGTTTCAGTATGAATTGCAGCAAGAAACCTAAATTTCTAGTGACAAAAATTGATGAAAAATCAAGATCAAAAGAAAAGGGTGAATTTTCCCAAAGCTCAAAAAGCAGCATTGGTGAATATAGTAGTAGCACGACAACAAGCATAAGTGAAGAGAGCAATCTGAGTGGCTCTAGTCGCAGTGGCCACAGGCCTCACATGTCAAAACACCTGAGATGGGAAGCTGTTCGTGCTGTTCAGCAGCAGCATGGGAACTTAAGTTTGAAACACTTCAAGCTGCTCAGGAGGCTTGGTTGTGGGGACATTGGAACTGTTTATCTTGCAGAACTAATAGGTACAAGCTGCCCTTTTGCTTTGAAAGTGATGGATAATGAGTTTTTGGCCAACCGGAAGAAAGTTTTGAGGGCCCAAACTGAGAGAGAGATCCTGCAGATGCTGGATCATCCTTTTCTTCCTACGCTCTATGCCTATATTACAACTGATAAGTTCTCTTGCTTGGTTATGGAGTATTGCCCTGGGGGAGATCTACATGTGCTGCGCCAGAGGCAACCATATAGGAATTTCTCAGAACAAGCAACCAGATTTTATGTTGCTGAAATTCTTCTTGCCCTGGAGTATTTGCATATGCTTGGAGTCATATATCGGGACCTGAAGCCTGAAAATATCCTTGTTCGAGAAGATGGCCACATTATGTTGACAGATTTTGACTTATCACTTAGGTGTTCTGTGAATCCAACTTTGGTCAAGTCATCTTCGCCGGATGTGGATTCAACAAAGAAGATGTCCAGTCCCTGTGCAGAGGCTAGCTGCATACACCCGTTCTGTCTACAACCTGATTGGCAAGTGTCCTGTTTCACTCCTATTTTTTTATCTGCTGGAGCAAAATCTCGAAAGATGAAATCCGAGGCTGCCCAGGTTGGCCCCCTGCCACAACTCGTTGTTGAGCCAACCAGTGCCCGCTCTAACTCATTCGTTGGTACCTACGAATACCTCGCTCCAGAGATCATCAAAGGTGAGGGCCATGGGAGTGCTGTGGATTGGTGGACTTTTGGTATATTTGTGTTTGAGCTTTTGTATGGTAAGACTCCCTTCAAGGGAGCTGGAAACGAGGAAACATTATCCAATGTCGTGTCACAGAGCCTTAAGTTCCCAGATGCGCCTATTGTCAGTTTTCACGCGAGAGACCTGATACGCGGATTGTTGATAAAAGACCCGGAGAATCGATTAGGTTCCGTAAAAGGCGCAGCAGAGATAAAACAACACCCTTTCTTTGAAGGCCTGAACTGGGCTCTGATAAGATGTGCAGCACCACCTGAGCTTCCCAGGTTTCGTGATTTTGGAAGCTGTGTTCCGTCTATGGCTTCACAGAAGGAGAATGCGAATGATTTAGAGGATACAGAAGATTGTGAGGAGTTTGAGCTGTTTTAG 2529 0.4326 MDASSSTGEIVESREEIISEFRMDEKAESSCAHRSGKKYSVEDDIDRLFQAIDFKNSARGSSTPRSQKSALKRPIRVCSSLASGIGIAEPVSLKQALRGLCISQASEMAALKRLSKPSSSSRASEAGTIKKLYTAVVDEGKGNLVEISIVPEISVPSGKMPREDKSSTSADHSTNFVDVTNPKPVTTRVASRDQILPLQSEGESEKLDAVAGKPVLPNPSRVDFEGEEMSEVKIVPASSSKASHCSTMLDKGQEVELHSEANQPSSSTSSGVEKCSSSTICLSKPMFRNMSFLRKKVKQELCSTSSGTTLCTRKVDSDLDPSTSNLNKETDKYNLKQEMKENDKLSPCSSNRSVEVNSNNVGADSIKTGFSMNCSKKPKFLVTKIDEKSRSKEKGEFSQSSKSSIGEYSSSTTTSISEESNLSGSSRSGHRPHMSKHLRWEAVRAVQQQHGNLSLKHFKLLRRLGCGDIGTVYLAELIGTSCPFALKVMDNEFLANRKKVLRAQTEREILQMLDHPFLPTLYAYITTDKFSCLVMEYCPGGDLHVLRQRQPYRNFSEQATRFYVAEILLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVNPTLVKSSSPDVDSTKKMSSPCAEASCIHPFCLQPDWQVSCFTPIFLSAGAKSRKMKSEAAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFVFELLYGKTPFKGAGNEETLSNVVSQSLKFPDAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPRFRDFGSCVPSMASQKENANDLEDTEDCEEFELF 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1099 842 Gene3D Phosphorylase Kinase; domain 1 456 541 - -
Lele29g1099 842 FunFam serine/threonine-protein kinase D6PK-like 686 809 - -
Lele29g1099 842 PANTHER FLIPPASE KINASE 1-RELATED 277 810 - -
Lele29g1099 842 MobiDBLite consensus disorder prediction 203 222 - -
Lele29g1099 842 Gene3D Transferase(Phosphotransferase) domain 1 685 808 - -
Lele29g1099 842 FunFam Serine/threonine-protein kinase D6PK-like 456 541 - -
Lele29g1099 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Lele29g1099 842 Gene3D Transferase(Phosphotransferase) domain 1 542 613 - -
Lele29g1099 842 CDD STKc_phototropin_like 456 814 - -
Lele29g1099 842 FunFam serine/threonine-protein kinase D6PK-like 542 609 - -
Lele29g1099 842 Pfam Protein kinase domain 688 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1099 842 Pfam Protein kinase domain 459 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1099 842 ProSiteProfiles Protein kinase domain profile. 458 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1099 842 SMART serkin_6 458 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1099 842 MobiDBLite consensus disorder prediction 398 429 - -
Lele29g1099 842 MobiDBLite consensus disorder prediction 391 435 - -
Lele29g1099 842 SUPERFAMILY Protein kinase-like (PK-like) 431 810 IPR011009 -
Lele29g1099 842 MobiDBLite consensus disorder prediction 156 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1099 Lele-ChrLele29 8708639 8711680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1099 381 842 AGC Kinase Gene Family AT3G52890 66.245 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele29g1099 Pkinase 3.9e-36 CL0016