Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1098 ATGTGTTTCTCTTCCTTTTTGTGTTCCTCACATTATTTTGTACCATCTATTAAGTTCATTAATAATACCAATCCAATGGATGAGAAAGTCAGAAAAAAAAGATCCAAGTCTAGCAGGAGCAAGGACTTTATGGATGTGCCATCAAATGATGAAAAGGATCTGGGACATGGTCTTGAGGTGGAGCCGGATATAGAAAAGAAACAGAAGCATAAGGATAAAAAGAAAAAATGCAGAACCGATGAAGTTTTCAATTTGAACAAAGTTGTTGAGGAAAATTGTACAGGTATAGCAGCCAAGGGACAAGATTGTCCCAGTGAAGGGAATGCCACATTTATGAGAAATGGAGAAGAGAACAATAAAAGTAAGAGAAAGAAAAGGAAGAAGGGAAAAGATAAGGATGAAATAATCAATGGTATCATTGTTGGTGATAATGAAATGCAGTTTAATGATAAGCAAGAAAGGAAAACAAAGAAAAGAAAACATTGCAATGATACAATCCCTGAAATGCAAGAAAACAATGCAACAGAGGTTATCGGGCTTAAAAGGAAAAAAGTTGGATCATCTTTAGCCAGTGTTAAGATGAATACTCATTCTGTTGTCACTAACAGTGATGGTCAAGCGAAGAAGATTAAGAAGAAGGAGAAACTAACTAAAAAAAGCAAAAGAATAGAAGATAATGAATTCAAAAGCAACGGTGGTGATCAAGCTTCAGCTGAAGGTGAAGGAGGTGATCCCCATTTGTCAAAAATCAATATGGGGGATGCTGCTGAACATGCTAGTTCTACCAAAGGTGATGATGATCAAGGCTTGAATCAGAAATGGAAAAGCACTAAGAAGAAGAAGAGGAAGGAAGGTAAACGAGTAAAATTTTCTGATCAAGTGGATGTTTTTGATGATGGCTTAGTGCAAGGGAAAAGGTTTACACCCGAGGAAGATGAGAAGATTAAAGAGGCTATTTACGGCTATATACATTCTCATGGGTTGGGGGATATTGATCAAGGCGTGGATATGATTCTCCATTGCTCATCTTATCCTAAGGTTAGAGGTTGTTGGAAGGAAATTGCATTGGCTTTACCTCACCGGCCTCAGGAAAGCGTATATCATCGTGGTCATATTTTGTTCGAAAGGGGGGATAGTCGTAAATGGGCCCCTGAAGAGTTAGAAATTGTACGAAAGTTCCATGAAAAACATGGATCTAACTGGAAAATGTTGGCCGATGCAATGGGGAAACATCGGTTTCATGTAAAGGATCAATGGCGTAGGATAAAATTAGAAAATATGAACAAAGGACATTGGTCACAAGAGGAGTATCAAAAATTATTTGATTTAGTAAATGCTGATCTGGGTCTGAGGGCTTTAGAGGAGAATAGAAAATATAAACATGGTATGTTGCGGGATAATATATGTTGGGAGGCAATTGGTGATAAGGTGACAACTAGAAACAGTCAAACTTGCTGTATTAAGTGGTATGAAAAATTAACATCTCCTATGGTTGCCGAAGGTGAATGGGCCGATACTGATGACTACCGCATGATTGATGCTTTATATACATTGGATGCCTGCAGTTTAGAGGAGGTGGAGTGGGATCATTTGCTTGAGCATAGGTCTGGTGATGTATGTAGAAAACGATGGAATCAAATGGTCCGGCATGTTGGAGAGCATGGGAACAAGTCATTTTCTGAGCTAGTGGAAATTCTTTCAAAGAGATATCGTCCTGACTTAGTGGAAGCGAGAGAAGCCTTTGATAGCCTGCCTTTGGTCCCTTGA 1767 0.3871 MCFSSFLCSSHYFVPSIKFINNTNPMDEKVRKKRSKSSRSKDFMDVPSNDEKDLGHGLEVEPDIEKKQKHKDKKKKCRTDEVFNLNKVVEENCTGIAAKGQDCPSEGNATFMRNGEENNKSKRKKRKKGKDKDEIINGIIVGDNEMQFNDKQERKTKKRKHCNDTIPEMQENNATEVIGLKRKKVGSSLASVKMNTHSVVTNSDGQAKKIKKKEKLTKKSKRIEDNEFKSNGGDQASAEGEGGDPHLSKINMGDAAEHASSTKGDDDQGLNQKWKSTKKKKRKEGKRVKFSDQVDVFDDGLVQGKRFTPEEDEKIKEAIYGYIHSHGLGDIDQGVDMILHCSSYPKVRGCWKEIALALPHRPQESVYHRGHILFERGDSRKWAPEELEIVRKFHEKHGSNWKMLADAMGKHRFHVKDQWRRIKLENMNKGHWSQEEYQKLFDLVNADLGLRALEENRKYKHGMLRDNICWEAIGDKVTTRNSQTCCIKWYEKLTSPMVAEGEWADTDDYRMIDALYTLDACSLEEVEWDHLLEHRSGDVCRKRWNQMVRHVGEHGNKSFSELVEILSKRYRPDLVEAREAFDSLPLVP 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1098 588 Pfam Myb-like DNA-binding domain 382 440 - -
Lele29g1098 588 CDD SANT 306 369 IPR001005 -
Lele29g1098 588 MobiDBLite consensus disorder prediction 259 274 - -
Lele29g1098 588 Gene3D - 422 498 - -
Lele29g1098 588 MobiDBLite consensus disorder prediction 27 77 - -
Lele29g1098 588 PANTHER GB|AAC33480.1 31 587 - -
Lele29g1098 588 CDD SANT 381 423 IPR001005 -
Lele29g1098 588 SMART sant 428 495 IPR001005 -
Lele29g1098 588 SMART sant 303 376 IPR001005 -
Lele29g1098 588 SMART sant 378 425 IPR001005 -
Lele29g1098 588 ProSiteProfiles Myb-like domain profile. 424 493 IPR001005 -
Lele29g1098 588 MobiDBLite consensus disorder prediction 196 287 - -
Lele29g1098 588 MobiDBLite consensus disorder prediction 99 131 - -
Lele29g1098 588 ProSiteProfiles Myb-like domain profile. 381 423 IPR001005 -
Lele29g1098 588 SUPERFAMILY Homeodomain-like 380 440 IPR009057 -
Lele29g1098 588 Gene3D - 383 421 - -
Lele29g1098 588 ProSiteProfiles Myb-like domain profile. 495 548 IPR001005 -
Lele29g1098 588 MobiDBLite consensus disorder prediction 27 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1098 Lele-ChrLele29 8680242 8682253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1098 376 549 MYB Transcription Factor Family AT4G32730 25.698 2.30e-06 48.9