Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1088 ATGAAGGCATTTTCTTCTTCTACTAACCATCTCTTCATCTCCATTTTCATAATCGTTTCTTCAATAATCTCAATTGCATCTTCTGAAAAACCCTACCAAGATGCTAACACACAGTTCATAAGAACATCTTGTACTTCCACAACCTACCCAAGGCTCTGCTTCGCCTCCTTATCGAAGCATGCCGGCTTCATACAAACCAACCGTGTGCTCCTCACCGGCACTTCCCTAAACGTGACCCTGGCGTCAGCTAAGGCGACGTCGGCGATGATGTCAACGCTGTCCAAGAGCTCCGGGATGAAGCCGAGGGAAGTGGCGGCGATGAGGGACTGCGTGGAGGAGCTGAGGAACTCGGTGGACGAACTCAGAAAGTCGATTGGCGAGATGAGTCAACTGGGAGACTCGAACTTTGAGCTCACCATGAATGATGTTCAAACTTGGGTTTCAGCTGCTTTGACTGATCAGAGCACTTGCAGTGATGGGTTTGAAGGAGTTAATAATGGAATTTTGAAGAACAATGTGAGAAGCCGAATTGTGCAAGTGGCTCAGCTTACTAGTAATGCTTTGGCTTTCATAAATCAGCTTGCTTCTTCACATGCTTAA 600 0.4683 MKAFSSSTNHLFISIFIIVSSIISIASSEKPYQDANTQFIRTSCTSTTYPRLCFASLSKHAGFIQTNRVLLTGTSLNVTLASAKATSAMMSTLSKSSGMKPREVAAMRDCVEELRNSVDELRKSIGEMSQLGDSNFELTMNDVQTWVSAALTDQSTCSDGFEGVNNGILKNNVRSRIVQVAQLTSNALAFINQLASSHA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1088 199 SMART PMEI_2 35 190 IPR006501 GO:0004857
Lele29g1088 199 FunFam Pectinesterase inhibitor 3 35 195 - -
Lele29g1088 199 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 194 IPR006501 GO:0004857
Lele29g1088 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 194 IPR035513 -
Lele29g1088 199 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 190 - -
Lele29g1088 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 196 IPR035513 -
Lele29g1088 199 CDD PMEI-like_3 42 196 - -
Lele29g1088 199 Pfam Plant invertase/pectin methylesterase inhibitor 39 189 IPR006501 GO:0004857
Lele29g1088 199 Coils Coil 104 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1088 Lele-ChrLele29 8574935 8575534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1088 40 194 Carbohydrate Esterase AT1G53830 31.902 6.89e-21 87.8