Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1082 ATGGAGTTTGAAATTTTAAGCTCTAAACTTTTATATCTTTTCGTATTTGGAAGCTTCGCTTTGAACGCTTTCACAGACTACGGATCCAATGCTCAACGCATTCCAGAAGATGAAGTGAAAGTTCTAAGAACTATATCATGGAAGATAGAGAATTTGAATTGGAACGTGAGCCCAAATTCTTGTATTGATGGAAGCTTCAAAAATACGACTATTAGTGAAAAGAACAGCATCATAAGGAATGTAACATGCAATTGCACTTTTTCAAGCGGAAAAGTTTGCCATGTTACACATATCCAAATGTCAGGTCTCAATCTATCTGGAACTTTACCAAATGAATTTGGGTATCTTACTCATCTGCAAAAACTTGATTTGTCTCACAGTTATTTAAAAGGATTAATCCCAAGGAGCTTTGCTAGACTCCCTCTTGTTGCATTAAACCTTGTGGCTAATCCAATTAGTGGTTCCATTCCAAAGGAAATTGGTGACATTACAACTTTGGAGGAGTTAGTATTGAAAGATAATATGTTAGAAGGAACTCTTCCTTCTAGTCTCGGAAAATTGAAGCAGTTACGCATATTGGTTCTTTCTGGAAATGATTTCTCAGGGACAATACCCGAAAGTTTTTGCAATTTGAAGAAACTAGAAACTATTTCATTAGATGGGAGCAATATAACAGGAAAATTACCCAATTTTATTGGGAATTGGACCGAACTGAAGCGACTGTTTTTGCAGGGAATGTCTATGGAAGGCCCAATTCCGACAACCATATCTCTGTTAACAAATTTGTATGAGTTGAGAATATCTGATTTGCATGGACCAGCGACAATGAGATTTCCTAATCTGGAGAATTTGACATCCTTGATATTCCTGGCATTGAGAAATTGCTCCATTCATGATTCCATTCCAAATTACATTGGTAAAATGGAAAACTTGAAGGCTTTAGATTTGAGCTTCAACAAGTTGATTGGTGAAATCCCAAGCAGCATAAGCTCGACTGGCGTGCATTACCTGTTTCTAACTGGAAATTCTTTGAGTGGAAAAGTTCCTGAATGGATCCTGCAAAACAGCAATGATTATTTTGATCTATCTTACAACAATTTTTCAGAGACTTCTGCGCCTACTTGTCAGTACAATAATATAAACTTGGCTTCAAGCTTATCATCTTCAGCAAACACCTCACGTACTTGCCTGAAAAGGGGCCTTCCTTGTGGTGGAAAACCCAAATATCATTCATTATTCATAAATTGTGGAGGATTAGAATTTGAATATGAAAGGAATAAATACGAAGGAGACATCAATCCTGGGGGTATCTCATTTTTCTTTGCTAGTAATGATAAATGGGCTTATAGCAGCACAGGAACATACTTAGGACAATATGATAATTACATAGCAACAAACATATTTTCTCTCAACATTACTGGTCCTGACTTCTACCAAACAGCTCGCCTTTCCCCTTTGTCTCTCAAGTACTATGGCCTCTGTATGATTAATGGAAATTACAATGTCAAGCTACACTTTGCTGAGATTATGTTTCCTCATCATGACCAAAATTTCAGCAGTCCTGGAAGGCGCATATTTGATGTTTCAATTCAAGGTAAGAAGTACTTGCGTGATTTCAACATTATGAAAGAAGCTGGGGGTGTTGGTAAGGGCATTGTCAGGGACTTTAATGTTAATGTCAATGATAATACCTTGGAGATTCATTTATACTGGGCAGGAAAAGGAACTAGATCTATTCCTGATTATGGTATTTATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAACTTCAAAATTTCTAGTATTTCTGCTGGAGCCATTGCTGGAATTGTGGTTGGATCATGTGTGTTCCTCATACTAATTGTATTTGTCCTTCGAGAGATGGATTTTCTACGTGGCAAAGATTCAAAAGACAATCAACTTTTAGATCTAAAAACGGGTTATTTCTCTTTAAAACAAATCAAATATGCCACTAATAACTTTGCTCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGGCCAGTATACAAGGGTGTACTATCAGATCGTGTTGTCATAGCAGTGAAGCAACTTTCCTCGAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATCATATCTGCTTTGCAACACCCAAACCTGGTAAAGCTTTATGGTTGTTGCGTTGAAGGAAACCAATTGTTGCTAATATATGAGTTCATGGAGAACAACAGTCTTGCTAGTGCTCTTTTCGGTGGGCAAGGGCAAAAGAGAGAGTTGGATTGGCCTACCAGAACGAAGATATGTATTGGGATAGCAAGAGGATTAGCTTTTCTTCATGAGGAATCAAGGCTGAAAATTGTGCATAGGGATATTAAGGCAACAAATGTATTACTTGATAAAGATTTGAATGCCAAGATCTCAGACTTTGGCTTAGCCAAACTTGACGAAGATGAGAATACTCATATTAGCACGAGAATAGCAGGAACAATTGGTTATATGGCTCCTGAATATGCAATGCGAGGATACCTGACTGACAAAGTAGATGTCTATAGTTTTGGAGTTGTTGCTTTAGAAATTGTAAGTGGAAAAAGCAACACAAGTTACAGGCCAAAAGAGAAGTTTGCTTATCTTCTGGATTGGGCTTATGTTCTTCAAGAGCAAGGAAACCTTCTTGAGCTGGTGGATCCAAGCCTTGGTTCAAGCTACTCCTCACTGGAAGCCATGAGAATGCTAGAGTTGGCACTCCTATGCACTAACCCATCTCCAACTATGAGACCATCCATGTCCTCTGTTGTTTGCATGCTTGAAGGAAAGTTACCGATCCAAGCGCCGATAACCAAGCTGCCGCCCCTGGAGAATGATCGGGATGCGAGATTCAAGGCCTTTGAGATACAATCATCTCAAGATAGCCATAGCCAAACCTTCAATTCTTCCACAAAATCACATGAAAGTGTGGACCAAAGAGTTGAAGCAATGGAGGGTCCATCGACTGGCTCCTGCATTTCTGATCTTCCAAGTAAATATTTTTCATATAGCATGCTTCTTAAGGATTCTACCTAG 3054 0.3847 MEFEILSSKLLYLFVFGSFALNAFTDYGSNAQRIPEDEVKVLRTISWKIENLNWNVSPNSCIDGSFKNTTISEKNSIIRNVTCNCTFSSGKVCHVTHIQMSGLNLSGTLPNEFGYLTHLQKLDLSHSYLKGLIPRSFARLPLVALNLVANPISGSIPKEIGDITTLEELVLKDNMLEGTLPSSLGKLKQLRILVLSGNDFSGTIPESFCNLKKLETISLDGSNITGKLPNFIGNWTELKRLFLQGMSMEGPIPTTISLLTNLYELRISDLHGPATMRFPNLENLTSLIFLALRNCSIHDSIPNYIGKMENLKALDLSFNKLIGEIPSSISSTGVHYLFLTGNSLSGKVPEWILQNSNDYFDLSYNNFSETSAPTCQYNNINLASSLSSSANTSRTCLKRGLPCGGKPKYHSLFINCGGLEFEYERNKYEGDINPGGISFFFASNDKWAYSSTGTYLGQYDNYIATNIFSLNITGPDFYQTARLSPLSLKYYGLCMINGNYNVKLHFAEIMFPHHDQNFSSPGRRIFDVSIQGKKYLRDFNIMKEAGGVGKGIVRDFNVNVNDNTLEIHLYWAGKGTRSIPDYGIYGPLISAISVTPNFKISSISAGAIAGIVVGSCVFLILIVFVLREMDFLRGKDSKDNQLLDLKTGYFSLKQIKYATNNFAPENKIGEGGFGPVYKGVLSDRVVIAVKQLSSKSKQGNREFVNEIGIISALQHPNLVKLYGCCVEGNQLLLIYEFMENNSLASALFGGQGQKRELDWPTRTKICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYAMRGYLTDKVDVYSFGVVALEIVSGKSNTSYRPKEKFAYLLDWAYVLQEQGNLLELVDPSLGSSYSSLEAMRMLELALLCTNPSPTMRPSMSSVVCMLEGKLPIQAPITKLPPLENDRDARFKAFEIQSSQDSHSQTFNSSTKSHESVDQRVEAMEGPSTGSCISDLPSKYFSYSMLLKDST 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1082 1017 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 633 737 - -
Lele29g1082 1017 MobiDBLite consensus disorder prediction 963 996 - -
Lele29g1082 1017 CDD STKc_IRAK 668 935 - -
Lele29g1082 1017 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 88 180 - -
Lele29g1082 1017 Pfam Malectin domain 412 592 IPR021720 -
Lele29g1082 1017 ProSiteProfiles Protein kinase domain profile. 662 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1082 1017 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 41 971 - -
Lele29g1082 1017 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 945 - -
Lele29g1082 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Lele29g1082 1017 ProSiteProfiles Leucine-rich repeat profile. 310 332 IPR001611 GO:0005515
Lele29g1082 1017 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Lele29g1082 1017 Gene3D Ribonuclease Inhibitor 198 395 IPR032675 -
Lele29g1082 1017 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 181 273 - -
Lele29g1082 1017 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 409 597 - -
Lele29g1082 1017 Gene3D Transferase(Phosphotransferase) domain 1 738 941 - -
Lele29g1082 1017 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1082 1017 Gene3D - 410 597 - -
Lele29g1082 1017 SUPERFAMILY L domain-like 73 379 - -
Lele29g1082 1017 MobiDBLite consensus disorder prediction 963 980 - -
Lele29g1082 1017 Pfam Protein tyrosine and serine/threonine kinase 665 931 IPR001245 GO:0004672|GO:0006468
Lele29g1082 1017 SUPERFAMILY Protein kinase-like (PK-like) 645 934 IPR011009 -
Lele29g1082 1017 Gene3D Ribonuclease Inhibitor 52 197 IPR032675 -
Lele29g1082 1017 Gene3D Phosphorylase Kinase; domain 1 627 737 - -
Lele29g1082 1017 Pfam Leucine Rich Repeat 310 330 IPR001611 GO:0005515
Lele29g1082 1017 Pfam Leucine Rich Repeat 118 139 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1082 Lele-ChrLele29 8397852 8408800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1082 1 1008 Receptor kinase-like Gene Family AT1G53440 56.947 0.0 1108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele29g1082 PK_Tyr_Ser-Thr 7.6e-49 CL0016