Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1081 ATGTTCGGTTGTGTGTGCGCATTAGGGGTGTATGTGAGTGTTCAAGGAAGGAATGCAGAGCACACTGAGGCGTTAGTGAAGGGATCAGGGATCGATGAAGAGCATCTTGGTTGTGAACTGATGAAATCGGAGCACGATGTGGAGGGCCATGGCAGATTTCAGTTTGGTGAAGATCGATCTTTGAAACCGAGCAGTCCGTCAGAGTTCAGGAAAATGCTGGTTCAATCAGCACTGGACCAAGCCCAAGCCATGCATAAGGAAGCTCAAGAATATGGCCCTAAGTGTGTGACGAAGATGCAGAAATAAGAAGAGATCAAAGCACTTGGTTTTCCGAGCTGGTTTTCTGGGCATGACCGGAGGTTGTTGAGCTTGAAGCCATCATCACTGAAGGCGCATCTTGTGGTGGCTCAAGACGGCACGGGCCATTTCAAGACTGTGCAAGCCGCAATTGATGTAGCTTCAAGTAGACGAGACTCACCATTACTACTGGCAGCAGAAGCGTTAAAGACGGAATTACCCCCGCTTCGTCCGCCACTGCAGAATTCTGGTAAGAAAGCCCCACTTGAAGGGCAGGCCAACAAGATCACAGCTCAAGGACGAGGTGACCCGTTAAAGAACACTGGAATATCGATCATCAGTTCTCATATTCGAGCGGCGCCGGATTTCAGGCGGGTGTCAAAGTCATTTGAGACCTATTTGGGTCAGGCATGGCAGCAATAA 720 0.4958 MFGCVCALGVYVSVQGRNAEHTEALVKGSGIDEEHLGCELMKSEHDVEGHGRFQFGEDRSLKPSSPSEFRKMLVQSALDQAQAMHKEAQEYGPKCVTKMQKXEEIKALGFPSWFSGHDRRLLSLKPSSLKAHLVVAQDGTGHFKTVQAAIDVASSRRDSPLLLAAEALKTELPPLRPPLQNSGKKAPLEGQANKITAQGRGDPLKNTGISIISSHIRAAPDFRRVSKSFETYLGQAWQQ 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1081 239 SUPERFAMILY Pectin lyase-like 187 238 IPR011050 -
Lele29g1081 239 SUPERFAMILY Pectin lyase-like 129 157 IPR011050 -
Lele29g1081 239 Pfam Pectinesterase 185 239 IPR000070 GO:0030599|GO:0042545
Lele29g1081 239 MobiDBLite consensus disorder prediction 173 202 - -
Lele29g1081 239 PANTHER PECTINESTERASE 185 239 - -
Lele29g1081 239 Gene3D - 70 161 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1081 Lele-ChrLele29 8366674 8369666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1081 185 238 Carbohydrate Esterase AT3G47400 61.111 3.48e-15 72.4