Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1070 ATGTCCACCAACAAAAACCCACTGAAGCAACCTCGTCATGATGAAACTCCCTCTGCTACCAGCAGCACACTCAAAAAGCACTTCTCTTCTTCTTCTTCCTCATCATCATCATCATCAATTCATCAATTCCTCCTTTCTCCTTTTAAATCAACCTCTCCAAACACCCCCTTCTTCTTCATCCTCACACCCTCTTCTTCTTCTTCTTCAATTCCACCAGCAGCCATGAAACCTCCTCCTTCTCTTTTCCCTCTCACATTCTTCTTCTTCTTCCTCTGTCAGACACAGCTTCTGGTTTTCTCAGCTACACCATCTGTTATCTTCTCTTTGCTTTCTCTCAAGTCTTCGCTCATTGACCCTCACAATACCCTCCATGACTGGAACTATTCTTCTTCCTCTAACAATTCTTCCCAAGACCCACCTGTCTGGTGTTCATGGTCAGGTATCACGTGCCACTCACGGACTTCTCAGATTATCACCATTGATCTTTCTCAGCGTAATCTCTCTGGTTTGATCTCTCCCCAAATCCGTTTCTTGACTAGTTTGAACCACTTGAATCTCAGCTGGAATGACTTCACTGGGATTTTCCCACCTGTGATTTTTGAACTCTCTGAGCTCAGAACTCTGGATATCAATCACAATTTCTTCAATTCAACTTTCCCGCCTGGGATTTCTAAGCTCAAGTTCTTAAGAGTGTTCAATGCTTTTAGCAATAACTTCGTTGGTCCTCTGCCTCATGAATTCATGAGGCTTCGGTTTCTTGAGAAGTTGAACCTTGGTGGGAGCTACTTCAATGGTACAATTCCCTCAGGTTATGGGAATTTACCAAGATTGAATTTCCTTTATCTTGCTGGGAATCTCTTGGAAGGTCCAATTCCATTTCAGTTAGGGTTCTTATCAGAATTGGAACGTCTTGAAATTGGGTACAACCAGTTTTCTGGAGGATTACCTGAAGAATTCGCATTATTATCAAGTCTGAAATACTTGGATATAGCTTCTTCTAACATTTCTGGCTCTCTAATTCATGATTTGGGGAACATGACCATGTTGGAGACATTGTTGCTGTACAAGAATCAGTTAGTGGGTGAGATTCCATCAAGCTTGGGGAATTTGAAAAGTCTCAATGCACTTGATTTGTCAGATAACAAACTCAGTGGGTCAATTCCTGGGGAAATTTCAATGTTGAAGGAACTAACCATTTTGAGCTTGATGAACAACAAGTTAACGGGAGAGATTCCACAAGGGATCGGAGATCTTCCAAAACTCGATACTCTGCTTCTATGGAACAATTCGCTTTCTGGAATTCTACCACAAACCCTAGGCTCCAGTGGATTACTCCAGAAACTCGACGTTTCCACGAATTTACTCAGAGGTTTAATCCCTCCAAGTGTTTGCAATGGAAGCAAGCTTATCAAGCTCATTCTCTTTGATAACGAATTTGAAGGAGCTTTCCCAGAATCACTCACTAATTGCACTTCACTGGTAAGGCTTCGAATTCAAAATAATCAGCTCAATGGAACCATCCCTGGTGGTTTTGGTCTTCTTCCGAATCTCGCCTTCGCCGATATGAGCAACAACAACTTCACCGGTCGGATTCCAGAAGATTTCGGTGATGCTCCGACATTGCAACACTTGAATCTCTCTGGGAACTCATTCGAAAATCCATTGCCAAGCAATATATGGAACGCGAGGAATTTATTGGTCTTCTCGGCGAGTTCTTCGAAAATTAACGGTCAGATTCCAGATTTCGTAGGGTGCAAGAACATTTACAGAATCGAATTGCAGGGAAATTTCATCAAAGGAAGCATCCCTCGGAGCATTGGGAACTGCGAGAGGCTTATTGTGTTGAATCTGAGTCGTAATTCGCTATCTGGTATCATCCCCATGGACATCTCAGTTTTACCCTCAATCACTGATGTTGACCTATCGCACAATTTTCTCTCCGGCACCATACCCGACGGTTTCAACAACTGCACCACCCTCGAGAACTTCAATGTCTCCTTCAATTCCCTCACCGGATCAATTCCTTCCGCCGGTTCAATCTTCCCGAACCTAAATCCCTCCTCCTTCTCCGGCAACGATGGCCTCTGTGGCGGCGTCCTCGCAAAGCCCTGCGCCATGGACACTACTCACTCCCCTGCAACGGAGGAACAACAGCAACATGATCATCCCAAGAGAACCACTGGTGCAGTGATGTGGATCGTTGCAGCTGCGGCTGCAGTCGGATTGTTCGCTCTAGTCGCCGGGACCCGATGCTTCCGATCTCATCACAGTCGTCCATTCATGAACAACCACGAGGTCGGACCGTGGAAATTAACCGCGTTCCAACGGTTGAATTTTACAGCAGAGGACGTGGTAGAGTGCATGACAGTGTCAAACAAAATCATAGGAATGGGTTCCACTGGAACAGTGTTCAAAGTGGAGATGCCAAGTGGCGAGATCGTAGCCGTTAAAAAGCTATGGGGCAAGCAAAAGGAGGCCTCCAACTGCAGCATCCGACGGCGGAGAGGGGTGCTAGCTGAAGTGGATGTATTAGGGAACGTGAGGCACAGGAACATAGTGAGATTGTTAGGGTGTTGCAGTAACAGGGAGAACACCATGCTGCTCTATGAGTATATGCCCAATGGGAATTTAGAAGACTTATTGCATGGCAAGAATGTTGATGGTGATTGGTTGATCAGGTATAACATAGCATTGGGGGTGGCACAGGGGGTTTGTTATCTTCATCATGATTGTGATCCGGTGATCGTTCATCGAGATCTCAAACCAAGTAATATATTATTAGATGCTGAAATGAAAGCTAGAGTGGCAGATTTTGGAGTGGCTAAGTTGATTCAAAGTAACGAATCCATGTCTGTTATTGCTGGATCATATGGCTACATTGCACCTGAATATGCATACACCCTACAAGTTGACGAGAAGAGTGATATTTATAGCTATGGAGTGGTGCTGATGGAGATTCTATGTGGAAGAAGATCGGTTGATGCAGAGTTTGGTGACGGAAATAGCATTGTGGATTGGGTTAAATCTAAGGTCAATACTAAAGATGGGATTGAAGACATATTGGATAAGAATGTCGGGGCCGGGTGTGCTTCTGTAAGGGATGAGATGAGACAGATGCTCAAAATCGCGTTGCTTTGTACCAGCCGGAATCCGGCAGATCGGCCCTCCATGAGAGATGTTGTGATGATGCTTCAAGAGGCCAAGCCAAAGAGGAAGATGTTTGATAATATTGTGTTAGGACAATGTGGTGGTAAAGATATTAGTAGTGGGGAGGATGATGATACTGTTTTGCCTCAAAAGGCAAAAGTGGAAATTTAA 3318 0.4451 MSTNKNPLKQPRHDETPSATSSTLKKHFSSSSSSSSSSSIHQFLLSPFKSTSPNTPFFFILTPSSSSSSIPPAAMKPPPSLFPLTFFFFFLCQTQLLVFSATPSVIFSLLSLKSSLIDPHNTLHDWNYSSSSNNSSQDPPVWCSWSGITCHSRTSQIITIDLSQRNLSGLISPQIRFLTSLNHLNLSWNDFTGIFPPVIFELSELRTLDINHNFFNSTFPPGISKLKFLRVFNAFSNNFVGPLPHEFMRLRFLEKLNLGGSYFNGTIPSGYGNLPRLNFLYLAGNLLEGPIPFQLGFLSELERLEIGYNQFSGGLPEEFALLSSLKYLDIASSNISGSLIHDLGNMTMLETLLLYKNQLVGEIPSSLGNLKSLNALDLSDNKLSGSIPGEISMLKELTILSLMNNKLTGEIPQGIGDLPKLDTLLLWNNSLSGILPQTLGSSGLLQKLDVSTNLLRGLIPPSVCNGSKLIKLILFDNEFEGAFPESLTNCTSLVRLRIQNNQLNGTIPGGFGLLPNLAFADMSNNNFTGRIPEDFGDAPTLQHLNLSGNSFENPLPSNIWNARNLLVFSASSSKINGQIPDFVGCKNIYRIELQGNFIKGSIPRSIGNCERLIVLNLSRNSLSGIIPMDISVLPSITDVDLSHNFLSGTIPDGFNNCTTLENFNVSFNSLTGSIPSAGSIFPNLNPSSFSGNDGLCGGVLAKPCAMDTTHSPATEEQQQHDHPKRTTGAVMWIVAAAAAVGLFALVAGTRCFRSHHSRPFMNNHEVGPWKLTAFQRLNFTAEDVVECMTVSNKIIGMGSTGTVFKVEMPSGEIVAVKKLWGKQKEASNCSIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRENTMLLYEYMPNGNLEDLLHGKNVDGDWLIRYNIALGVAQGVCYLHHDCDPVIVHRDLKPSNILLDAEMKARVADFGVAKLIQSNESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILCGRRSVDAEFGDGNSIVDWVKSKVNTKDGIEDILDKNVGAGCASVRDEMRQMLKIALLCTSRNPADRPSMRDVVMMLQEAKPKRKMFDNIVLGQCGGKDISSGEDDDTVLPQKAKVEI 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1070 1105 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 320 1066 - -
Lele29g1070 1105 FunFam leucine-rich repeat receptor-like protein kinase TDR 872 1076 - -
Lele29g1070 1105 ProSitePatterns Protein kinases ATP-binding region signature. 795 818 IPR017441 GO:0005524
Lele29g1070 1105 SUPERFAMILY RNI-like 160 506 - -
Lele29g1070 1105 Pfam Leucine rich repeat N-terminal domain 108 150 IPR013210 -
Lele29g1070 1105 Gene3D Phosphorylase Kinase; domain 1 760 871 - -
Lele29g1070 1105 ProSiteProfiles Protein kinase domain profile. 789 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1070 1105 Gene3D Ribonuclease Inhibitor 107 229 IPR032675 -
Lele29g1070 1105 Gene3D Ribonuclease Inhibitor 230 295 IPR032675 -
Lele29g1070 1105 SMART LRR_typ_2 633 656 IPR003591 -
Lele29g1070 1105 SMART LRR_typ_2 178 197 IPR003591 -
Lele29g1070 1105 SMART LRR_typ_2 202 226 IPR003591 -
Lele29g1070 1105 SMART LRR_typ_2 298 321 IPR003591 -
Lele29g1070 1105 SMART LRR_typ_2 370 394 IPR003591 -
Lele29g1070 1105 SMART LRR_typ_2 418 441 IPR003591 -
Lele29g1070 1105 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 293 387 - -
Lele29g1070 1105 ProSiteProfiles Leucine-rich repeat profile. 372 394 IPR001611 GO:0005515
Lele29g1070 1105 SMART serkin_6 789 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1070 1105 Gene3D Transferase(Phosphotransferase) domain 1 872 1079 - -
Lele29g1070 1105 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 757 871 - -
Lele29g1070 1105 SUPERFAMILY Protein kinase-like (PK-like) 792 1064 IPR011009 -
Lele29g1070 1105 FunFam Leucine-rich repeat receptor-like protein kinase TDR 391 706 - -
Lele29g1070 1105 Pfam Protein kinase domain 792 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1070 1105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 915 927 IPR008271 GO:0004672|GO:0006468
Lele29g1070 1105 Pfam Leucine rich repeat 587 644 IPR001611 GO:0005515
Lele29g1070 1105 Pfam Leucine rich repeat 492 550 IPR001611 GO:0005515
Lele29g1070 1105 Pfam Leucine rich repeat 349 407 IPR001611 GO:0005515
Lele29g1070 1105 MobiDBLite consensus disorder prediction 1 37 - -
Lele29g1070 1105 Gene3D Ribonuclease Inhibitor 296 422 IPR032675 -
Lele29g1070 1105 Gene3D Ribonuclease Inhibitor 423 707 IPR032675 -
Lele29g1070 1105 SUPERFAMILY L domain-like 445 697 - -
Lele29g1070 1105 FunFam Leucine-rich repeat receptor-like protein kinase 105 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1070 Lele-ChrLele29 8253614 8258576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1070 82 1072 Receptor kinase-like Gene Family AT1G08590 42.266 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele29g1070 Pkinase 1.3e-48 CL0016