Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1068 ATGGTTCGATTGGAGGACTTCATGTGCCATAGCAACCTCGAGATTGAGCTCCCAGAGTGGGTCAACTTCATTACTGGTCAAAATGGAAATTCTAATGCAAAACTTTTCATAAGCTTCTATCAAGCTCTACATCTTCCTCATTGTCTTTCCTCAAGAAAAGGTTGTCTTTCTTCATTAATAATGGCTGTAAAGGGTGGGAGGATTCTCTCCTCTAATGCAGTTACTGTTTTAGGGAACAAGTTTGTTAGAGTAAGAATAAGAGATGTGCTGGGGAATGTAGAATATCCTCCAAAACAGACAAGAAAGACCCCAGAGATTGATATAGAGAATCCATGTGTAGTTATGAGTCAAGACAAAAGCAGGGAATTTTTGTATTCAGGGAATGACAAGGATAAATTTAAGTTCTTTTACAAGGCTACACTTCTTCACCAAGTTGATGATCTTTTGAAAAGTGTTTCTAGAGGATTAGAGCATTCATTTGGACTTCTTGGAGGATTAGAGGCTACAATAAGGCCATTAGAGAAGGAGCTTAATGAGTTAAGAGTCAAAATTACAAACATGGAACAAGTTGAACAAATATCACTGCAGATTCAGCAGTTAAAGAAAATCTTACGTGGACTCTTTGTTCTGCAGCATCTGATTGAAGAATTGGTGGCATGTTTAAATAAGAAGAAAGGTCATATTAAAAACTTGTTTGAAAAGACATCTGAAGTGAAGCAGAAGAAGCAAAATTTACAACAATATATATCTATGGCTGCAAAAGAAGTACTTGAAAAAGAACGAGAGTGCAAGCTTATAACCGTCAGTATTGAGAAGGTGGCTGAAGAATCTGAGATAGAGGAGATGCTGAAGGTGCTCCAAAATGAGGTTGATGCTGCTGAATCAGCTCTGACAAGGTTGAGGGAAGAGGAAGCTATGCTAGCTGAGAATGTACAAAAACAAAGTAATGAAATAAGAAAGATTGCTGATGAGATTGAAGGACATGATAGACGGTCTCATGATATCAACTTTCACATCCGTGAGCTTAAACAACACCAAACCAATAAGGTTACAGCTTTTGGAGGAGATAGAGTGATGAACCTACTGTGTATTATTGAGAGAAGCTATCGGAGTTTTAAGAGGCCACCTATTGGTCCAATTGGCTCCTATCTGAACCTGGTTAATGGCGATAAGTGGGGTGTTGCTATTGAGCATGCGATTGGGAAGATGCTGAATGCTTTTATAGTGACTGATCACAAGGATTCTCTTCTTTTGAGAGAATGTGCAGAGGAAGCAAACTATGGTCACCTCTAA 1293 0.3859 MVRLEDFMCHSNLEIELPEWVNFITGQNGNSNAKLFISFYQALHLPHCLSSRKGCLSSLIMAVKGGRILSSNAVTVLGNKFVRVRIRDVLGNVEYPPKQTRKTPEIDIENPCVVMSQDKSREFLYSGNDKDKFKFFYKATLLHQVDDLLKSVSRGLEHSFGLLGGLEATIRPLEKELNELRVKITNMEQVEQISLQIQQLKKILRGLFVLQHLIEELVACLNKKKGHIKNLFEKTSEVKQKKQNLQQYISMAAKEVLEKERECKLITVSIEKVAEESEIEEMLKVLQNEVDAAESALTRLREEEAMLAENVQKQSNEIRKIADEIEGHDRRSHDINFHIRELKQHQTNKVTAFGGDRVMNLLCIIERSYRSFKRPPIGPIGSYLNLVNGDKWGVAIEHAIGKMLNAFIVTDHKDSLLLRECAEEANYGHL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1068 430 Coils Coil 163 190 - -
Lele29g1068 430 Coils Coil 276 331 - -
Lele29g1068 430 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 105 202 - -
Lele29g1068 430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 249 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1068 Lele-ChrLele29 8236706 8245879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1068 2 430 Structural Maintenance of Chromosomes family AT5G07660 39.802 6.34e-107 338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1068 29 8236706 8245879 Lele31g0468 31 12575813 12583087 hybridization