Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1064 ATGGCTCATAATAAAATTTCTCTCTTCCTTGCAATAATTCATATTGCTTGTTTGGTTTGGTCACTGTGCCATGGCCATCTTACTTCAGGACTTACAGAAACTGAAGCTCTTCTCAGATGGAAGCAAAGTCTGCCATATCAACCAATTCTGGATTCATGGGTCTCTCAGCCTCAAGCCAATTCCACTGAAACCCAAGCCCCATGTTCATGGCGTGGAATAAAGTGTGATTCTTCAGGAACTGTGATTGAACTCGACTTGAATAACACTGGTCTCAAAGGTACCCTCAAAAACTTGAATTTCTCATCATTCCCAAATCTTGTTCTTCTTAATCTCAAGTTCAATCAGCTCACTGGCCCCATACCAGAAACAATTGGCTTGCTCTCAAAACTAGAATTCCTTGACCTTAATCGTAATCATTTCAATGGCACTATACCTCTTTCTCTTGCTAATCTTACTCAACTTTATGAACTTGACCTTTCACAGAATCATATAACTGGGATATTAGATCCTCGTCTATTCCCTGATGGATCTGATGAACCCAAAACAGGCTTGATTGGTATCAAATATCTTGTTCTTCAAGGCTTGCTCCTTGGAGGCAAAATTCCAAATGAAATAGGGAACTTGAAACAGTTGACTATTCTAGCTCTATATCAAAACAGCTTTTACGGACCTATACCTCAGTCTCTAGGGAATTGTACAAATTTAAACATTCTCTCATTGGCTGCAAATAGTCTATCAGGCACAATTCCACCTATTCTTGGTACATTACCAAATCTAACTGATGTTCGCTTGTTTATCAACAATTTATCTGGTCCTTTACCACAAGGATTTGAGAATCGTTCTTTTACTATGCTCAATCTCTCCAATAACAATTTCACTGGCTATTTACCACCACAAATATGCAAAAATGGTGACTTACTTGAGTTCACTGCAGCTTACAATAGTTTCACTGGTCCAATACCAATGAGCCTCAGAAACTGCACATCTTTGGTTAGAGTTCGTCTTGAACATAACCAATTGACAGGATTTGTAGATGAAGATTTGGGAGTTTATCCTAATCTTACCTATATTGACCTCAGCTATAATAGGCTTCAAGGTAAGCTTTCTGCAAATTGGGCTGCCTGCAAGAGCTTGCAAGCTCTTATCATGGCTGGAAATTCAATAGAGGGAATTTTACCTAGTGAGATCTTTCAGTTGAAGAAACTAAAAAAACTTGACTTGTCTTCAAACTTCATATCTGGTGAGATTCCTTCCCAAATTGGAATTGCCTTTAGCTTGTATCATCTTCACCTGGGAAGGAACAATCTTTCAGGTATGATACCAGAAGGAATTGGGAAGCTTTCTAGTTTGGAGTCTTTAGATTTGTCCAAGAATAGATTAAGGGGACCTATCCCTTATCAAATAGGTGATTGCTATAAGTTGAGGGATTTAAATATTAGCAACAATTACTTTACTGGCAAAGTCCCATACCAAATGGGAAATCTTGTGGCTTTACAAGATTTTTTGGACTTGAGTCACAATTCACTTTCTAGAGAAATCCCTGTTGATCTTAGTAAACTCAACAAGTTGATAAGCTTGAACATGTCTCACAATAATTTTTCTGGTCCTTTCCCTAATTACTTGGCAAAAATGTTAAGCTTGTCAAGCATCAATCTCTCCCATAACAATTTAGAAGGTCCTGTACCGGATAGTGGAATTTTTAATTCTTCTAATCCAGTGGATCTAAGTAACAACAAAAATTTATGTGGGAAGATCCAAGGTTTAAAACCTTGCAACATCTCAATTGTAAAGCCACATGGCGTAACTAACAAAAAGAAAGTCGTGATATTTGTCACTTCTTCTTTGGCTGTGGCATTGATTTTGATGGGAGTGGTTGGGATTCTTATTATTCTCCATAAGAGAAAGTCAAGAGCTGTAGAACATAACACTAGAGCCAGAAAAGAAAATCTTTTCTCTATATGGCACTTTGATGGAAAAATCATGTATGATGATATAATTGAAGCAACTGAGAACTTTCATGAGAAATACTGCATTGGGGAGGGAGCATTTGGAAAAGTTTACAAACTGATGTTGCCAGAGGAGGAAAGAGTTTATGCTATAAAAAAGTTGATAAGTGAAGAAGATAGCTTGGACATTGAGAGTATAAAAGCTTTTGAAAGTGAGATCAAAGCCTTGACAGAAACTCGACACCGGAACATAGTGAAGTTGTATGGATTCTGCTCACAAAGGTTGCAAACATTTCTGATTTATGAGTACATGGAAAGAGGCAGCTTAGCTTATATGCTTAGGAATAATGAAGAAGCATTAGAGTTGGATTGGTCAAAAAGGTTTAATATTATCAAGGGTGTAGCAGAGGCTTTATCATATATGCATCATGATTGTAATCCAGCAATTGTGCATAGAGACATATCAAGCAACAACGTTTTGTTGTCCTCAAATCTTGCGGCCTATGTTTCAGATTTTGGCACAGCAAGGTTCTTGAAGACTGATTCATCAATCTGGACAACATTTGCAGGCACATATGGCTATGCTGCTCCAGAGCTTGCATACACAATGGAAGTGACGGAGAAAGTAGATGTGTATAGCTTTGGTGTTTTGGCTATTGAGGTGCTTATGGGAGAGCATCCTGGTGATTTAATATCACGTATTCAAATGTATGGGATTAATCAGATCACCTTCCAAGATATTCTGGACCCTCGCTTACTAGCAACAAATGAGCAAAACTTGAAGAAACTGGCTTTGATTTGGCAAATAGCTCTTTCATGCTTGCAAACCAACCCTCAATCTCGACCAACCATGAGAAGCATCGCCAACATGATTGAAATAGAGACTATTCATTAG 2841 0.3798 MAHNKISLFLAIIHIACLVWSLCHGHLTSGLTETEALLRWKQSLPYQPILDSWVSQPQANSTETQAPCSWRGIKCDSSGTVIELDLNNTGLKGTLKNLNFSSFPNLVLLNLKFNQLTGPIPETIGLLSKLEFLDLNRNHFNGTIPLSLANLTQLYELDLSQNHITGILDPRLFPDGSDEPKTGLIGIKYLVLQGLLLGGKIPNEIGNLKQLTILALYQNSFYGPIPQSLGNCTNLNILSLAANSLSGTIPPILGTLPNLTDVRLFINNLSGPLPQGFENRSFTMLNLSNNNFTGYLPPQICKNGDLLEFTAAYNSFTGPIPMSLRNCTSLVRVRLEHNQLTGFVDEDLGVYPNLTYIDLSYNRLQGKLSANWAACKSLQALIMAGNSIEGILPSEIFQLKKLKKLDLSSNFISGEIPSQIGIAFSLYHLHLGRNNLSGMIPEGIGKLSSLESLDLSKNRLRGPIPYQIGDCYKLRDLNISNNYFTGKVPYQMGNLVALQDFLDLSHNSLSREIPVDLSKLNKLISLNMSHNNFSGPFPNYLAKMLSLSSINLSHNNLEGPVPDSGIFNSSNPVDLSNNKNLCGKIQGLKPCNISIVKPHGVTNKKKVVIFVTSSLAVALILMGVVGILIILHKRKSRAVEHNTRARKENLFSIWHFDGKIMYDDIIEATENFHEKYCIGEGAFGKVYKLMLPEEERVYAIKKLISEEDSLDIESIKAFESEIKALTETRHRNIVKLYGFCSQRLQTFLIYEYMERGSLAYMLRNNEEALELDWSKRFNIIKGVAEALSYMHHDCNPAIVHRDISSNNVLLSSNLAAYVSDFGTARFLKTDSSIWTTFAGTYGYAAPELAYTMEVTEKVDVYSFGVLAIEVLMGEHPGDLISRIQMYGINQITFQDILDPRLLATNEQNLKKLALIWQIALSCLQTNPQSRPTMRSIANMIEIETIH 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1064 946 Gene3D Ribonuclease Inhibitor 181 280 IPR032675 -
Lele29g1064 946 FunFam Nuclear pore complex protein NUP107 31 173 - -
Lele29g1064 946 Pfam Protein kinase domain 673 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1064 946 FunFam Leucine-rich repeat receptor protein kinase MSP1 634 752 - -
Lele29g1064 946 PRINTS Leucine-rich repeat signature 354 367 - -
Lele29g1064 946 PRINTS Leucine-rich repeat signature 447 460 - -
Lele29g1064 946 ProSiteProfiles Protein kinase domain profile. 672 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1064 946 ProSitePatterns Tyrosine protein kinases specific active-site signature. 798 810 IPR008266 GO:0004672|GO:0006468
Lele29g1064 946 SUPERFAMILY L domain-like 314 583 - -
Lele29g1064 946 FunFam MDIS1-interacting receptor like kinase 2 753 946 - -
Lele29g1064 946 Gene3D Phosphorylase Kinase; domain 1 632 752 - -
Lele29g1064 946 SUPERFAMILY L domain-like 67 413 - -
Lele29g1064 946 Gene3D Ribonuclease Inhibitor 281 594 IPR032675 -
Lele29g1064 946 Pfam Leucine rich repeat 425 483 IPR001611 GO:0005515
Lele29g1064 946 Pfam Leucine rich repeat 352 410 IPR001611 GO:0005515
Lele29g1064 946 SUPERFAMILY Protein kinase-like (PK-like) 651 942 IPR011009 -
Lele29g1064 946 Gene3D Transferase(Phosphotransferase) domain 1 753 945 - -
Lele29g1064 946 FunFam Piriformospora indica-insensitive protein 2 201 298 - -
Lele29g1064 946 SMART LRR_typ_2 399 423 IPR003591 -
Lele29g1064 946 SMART LRR_typ_2 127 150 IPR003591 -
Lele29g1064 946 SMART LRR_typ_2 544 569 IPR003591 -
Lele29g1064 946 SMART LRR_typ_2 447 471 IPR003591 -
Lele29g1064 946 SMART LRR_typ_2 495 520 IPR003591 -
Lele29g1064 946 SMART LRR_typ_2 151 175 IPR003591 -
Lele29g1064 946 Gene3D Ribonuclease Inhibitor 31 175 IPR032675 -
Lele29g1064 946 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 300 594 - -
Lele29g1064 946 Pfam Leucine rich repeat N-terminal domain 33 76 IPR013210 -
Lele29g1064 946 ProSitePatterns Protein kinases ATP-binding region signature. 678 702 IPR017441 GO:0005524
Lele29g1064 946 PANTHER LEUCINE RICH REPEAT KINASE 2 281 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1064 Lele-ChrLele29 8199026 8202302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1064 10 889 Receptor kinase-like Gene Family AT4G08850 40.143 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele29g1064 Pkinase 3e-49 CL0016