Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1062 ATGTACTCAATGGCTCAACCTCTACATAAAATCTCTACCACCCTTACATTTCACCTTACTTGCTTCCTTTTTATGTTTCTACGTCATTTCACTTTGGGAATTACTGAATCTGAAGCTCTGATCAAATGGAAGCAAAGTCTCCCACACCAACCAATATTGGATTCATGGGTCCTTCCACCTTACAACAACTCTAAAGCAGTTCAAAGCCCATGCTCATGGCGTGGAATAACTTGTGATAATTCTACAGGAAGTGTGATCGGAATAAACTTGGCTGAAACTGGCCTTGAAGGTACCCTTCAAAACTTAAACTTGTTTGCATTTCCAAATCTTCTTCATCTTGATCTCAACACAAACAACCTCGCTGGCAGTATACCAGAAAACATTGGGGTCCTCTCTAAACTACAATTTCTTGACCTTTCTACTAATCTCCTCAATGGCACTTTACCTCTTTCTCTTGCAAATTTGACTCAAATTGGATTGATTGGGATTAGAAATCTTCTCTTTCAAGACACCAAGCTTGGTGGTAGAATTCCAGATGAAATAGGGAACGTAAGGAATTTAACTGTGTTAGCTCTAGATTGGAATAGCTTCTATGGCCCTATTCCTCCATCTCTTAGAAACTGTTCACATTTAGGTGTTCTTAGGATGTCTGAAAACCAACTCTCAGGCATGATTCCCCCAAGTATTGGTAGATTGAGTAATCTATCTGATGTGCGCTTCCTCATGAATAATTTGTATGGTCCTGTTCCTCAGGAATTTGGAAATCTCTCTTCTTTAACTGTACTGCATCTTGCTGAAAACAACTTCACCGGAGAGTTGCCACCACAAGTGTGCAAAGCTGACATCTTTCAATTGCATCAATTACAAGAGCTTGATCTATCTTCCAATCAAATATCTGGAGAGATTCCTCCCCAAATAGGGAATTTCTCCAGAATGTCTGTTCTATCTTTGAGTAGCAACACTCTATCAGGATACATAACAACTAGCATTGGGAAGTTGTCAAATTTGCATACTTTAGACTTGTCATCAAACATGCTAAGAGGACATGTCCCTTCTCATATAGGGGATTGCTCAAACTTAATGCGTTTAAATTTGAGCAATAACCACTTCATTGGCAAAGTCCCGTATCAAATAGGAAATCTTAAATACTTGCAAGATTTTTTGGACTTGAGCTATAATTCACACTGTGGAGAAATCCCTGTGGATCTCAGTAAACTCAATAGCTTGATAAGCTTGAATGTTTCTCACAATAATTTGTCAGGTCCTATCCCTAATTCCCTAACAACAATGCAAAGCTTGTCAATCCTCAATCTCTCTTACAATAACCTAGAGGGGCCTATAAAGGAAAGTGGAATTTTCAATTATTCTAATCAAGTGGATTTGAGTCACAACAAAAACTTATGTGGGAGGATCCAAGGTTTGAAACCTTGCAATGTTTCAATTTTAAAACCACTTGGAGAAGAGCTTGCATACAAAATGGAAGTGACTGAGAAAGTAGATGTGTACAGCTTTGGTGTTTTGGCTATTGAGGTGCTTATGGGAGAGCATCCTGGTGATTTAATATCACGTGTTCAAATGTATGGGATTAATCAGATCAGCTTCCAATATATTCTGGACCCTCGCTTATCATCAACAAATGAGCAAAACTTGAAGAAATTGGCTTTGATTTGGAAAATAGCTCTTTCATGCTTACAAACCAACCCTCAATCTCGACCAACCATGAGAAGCATTGCCAGCATGATTGAAATAGAGACTATTCATTGA 1764 0.3855 MYSMAQPLHKISTTLTFHLTCFLFMFLRHFTLGITESEALIKWKQSLPHQPILDSWVLPPYNNSKAVQSPCSWRGITCDNSTGSVIGINLAETGLEGTLQNLNLFAFPNLLHLDLNTNNLAGSIPENIGVLSKLQFLDLSTNLLNGTLPLSLANLTQIGLIGIRNLLFQDTKLGGRIPDEIGNVRNLTVLALDWNSFYGPIPPSLRNCSHLGVLRMSENQLSGMIPPSIGRLSNLSDVRFLMNNLYGPVPQEFGNLSSLTVLHLAENNFTGELPPQVCKADIFQLHQLQELDLSSNQISGEIPPQIGNFSRMSVLSLSSNTLSGYITTSIGKLSNLHTLDLSSNMLRGHVPSHIGDCSNLMRLNLSNNHFIGKVPYQIGNLKYLQDFLDLSYNSHCGEIPVDLSKLNSLISLNVSHNNLSGPIPNSLTTMQSLSILNLSYNNLEGPIKESGIFNYSNQVDLSHNKNLCGRIQGLKPCNVSILKPLGEELAYKMEVTEKVDVYSFGVLAIEVLMGEHPGDLISRVQMYGINQISFQYILDPRLSSTNEQNLKKLALIWKIALSCLQTNPQSRPTMRSIASMIEIETIH 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1062 587 Gene3D Ribonuclease Inhibitor 163 279 IPR032675 -
Lele29g1062 587 Gene3D Transferase(Phosphotransferase) domain 1 477 585 - -
Lele29g1062 587 Pfam Protein tyrosine and serine/threonine kinase 488 579 IPR001245 GO:0004672|GO:0006468
Lele29g1062 587 SUPERFAMILY Protein kinase-like (PK-like) 488 583 IPR011009 -
Lele29g1062 587 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 80 279 - -
Lele29g1062 587 Gene3D Ribonuclease Inhibitor 280 476 IPR032675 -
Lele29g1062 587 SUPERFAMILY L domain-like 163 482 - -
Lele29g1062 587 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 280 480 - -
Lele29g1062 587 Pfam Leucine rich repeat N-terminal domain 36 79 IPR013210 -
Lele29g1062 587 SUPERFAMILY L domain-like 67 158 - -
Lele29g1062 587 Pfam Leucine Rich Repeat 408 427 IPR001611 GO:0005515
Lele29g1062 587 Pfam Leucine Rich Repeat 287 308 IPR001611 GO:0005515
Lele29g1062 587 PANTHER OS04G0122200 PROTEIN 221 480 - -
Lele29g1062 587 PRINTS Leucine-rich repeat signature 288 301 - -
Lele29g1062 587 PRINTS Leucine-rich repeat signature 333 346 - -
Lele29g1062 587 SMART LRR_typ_2 285 309 IPR003591 -
Lele29g1062 587 SMART LRR_typ_2 406 430 IPR003591 -
Lele29g1062 587 SMART LRR_typ_2 333 357 IPR003591 -
Lele29g1062 587 SMART LRR_typ_2 107 131 IPR003591 -
Lele29g1062 587 SMART LRR_typ_2 256 280 IPR003591 -
Lele29g1062 587 Gene3D Ribonuclease Inhibitor 34 162 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1062 Lele-ChrLele29 8128890 8132135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1062 34 485 Receptor kinase-like Gene Family AT4G08850 33.398 7.75e-69 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele29g1062 PK_Tyr_Ser-Thr 4.9e-07 CL0016