Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1058 ATGAACAATAACAGAACTGATGCTTACCTTGCAGTTCAAGCTACATGTGTGATTTTCTTGGCACTTTGTGTTTTAACTTCTGGAGAGACAGAAACAGAGGCCCTTCTCAAGTGGAAACAGAGTCTTCCAAATCAACCAATTCTGGAGTCATGGGTCTCAAGTGCAGCTCAAAGCCCATGTTCATGGCGTGGAATAACATGTTATAATTCCTCAGGAAGTGTGATTGCAATAAACTTGGCTTACACTGGTCTTGAAGGTACCCTCCAAAACTTGAACTTCTCTGCATTTCCGAATCTTCTCCGCCTCGATCTCAAAACAAACAACCTCGTCGGTAGCATACCAGAAAACATTGGTGTGCTTTCTAAACTGCAATACCTTGACCTTTCTACAAATAGCCTCAATGGCACTTTACCTCTTTCTCTTGCTAATTTGACTCAAGTTTATGAGCTCGATGTTTCACGAAACAGCATCACCGGCATATTAGACCCTCGTCTTTTTCCTGATGGTTCTGATCCACCCAAGATAGGTTTGATAGGAATCAGAAGACTTCTCTTTCAGGACAACCTGCTTGGTGGTAGAATTCCAGATGAAATAGGTAATATAAGAAATTTAACTGTGTTAGCATTAGATGGGAATAGCTTCTATGGTCCTATTCCCCCGTCTCTAGGGAATTATCAACATTTTGGTGTGTATCCTAATCTTACTTACATGGACTTCAGCTACAATAACGTGCAAGGTGAGCTCTCTTCAAATTGGGGAAGCTGCAAAAACTTGCAATATCTTAGTATGTCTGGAAACTCAATAGGCGGTACTATACCTGATGAGATTTTTAAACTGAATCAACTTGTAGAGCTACATCTGTCTTCCAATCAAATATCAGGAGAGATTCCCCAACAAATAGGGAATTCCTCTAGCCTTTCCGCTCTATCTTTGAGTAACAACAAACTTTCAGGATTGATACCGGCAAGCATTGGGAAGTTGTCGAATTTGCGAAAATTAGACTTATCATCAAACATGCTAAGAGGACCAATCCCTTATCAGATAGGGGATTTCTCAAACTTGCTGAGTTTAAATTTGAGCAATAATGACTTGAACGGAACAATCCCATACCAAATTGGAAATCTGGCTGCCTTACAAGATTTGTTGGATTTCAGTTACAATTCACTCTCTGGCCAAATTCCAGCTGATCTTAGCAAGCTGAAAAATTTGATAAGCTTGAATATCTCTCACAACAATCTTTCTGGTTCTATCCCTGATTCCCTTGGTGAAATGTTGAGTTTGTCAAGTGTCAACATCTCCTACAACAATTTAGGGGGTCCTATACCGAATAGTGGCATATTTAATTCTTCCTATCCCGTCGATTTGCGTAACAACAAAGAGTTATGCAGGAATATACAAGGGCTGCAACCTTGCAATGTGTCGTACGTGGAACCTAGAGGAGGAAGCAATAAAAAGAAAGTTATAGTTGCCATTGTTGCTTCTTTGAGAGGTGCACTACTTGTTTCGTCATTGTTAGTTTGCATTTTTGTTTTTGGCTGTAAGAGAAGATCTATGCAACAAATTCTGCACCGGAGAGAAAAAGCCAATTTTCGATATCGCACATATGGCTATGCAGCTCCAGAGCTTGCATACACAAAGGCAGTGACTGAAAAATGTGATGTGTTTAGCTTCGGTGTTTTGGCTTTTGAGATTCTCACAGGAAATCATCCAGGAGATCTAATTTCTCACATACAAACATATGGTGCTCAAAACATCAACTTCAAGGAGATTTTAGACCCACGTCTTTCAGCTCCTACAAAGCAAGAAAATTTGAAGGAATTGGCTTTGATTAGTAATCTTGCTATTTCTTGTTTACAGACAAACCCTCAATCACGACCAACTATGCGAAGCATAACTCACATGATTGACATGGAAATAGCTCATGATTCATGA 1932 0.398 MNNNRTDAYLAVQATCVIFLALCVLTSGETETEALLKWKQSLPNQPILESWVSSAAQSPCSWRGITCYNSSGSVIAINLAYTGLEGTLQNLNFSAFPNLLRLDLKTNNLVGSIPENIGVLSKLQYLDLSTNSLNGTLPLSLANLTQVYELDVSRNSITGILDPRLFPDGSDPPKIGLIGIRRLLFQDNLLGGRIPDEIGNIRNLTVLALDGNSFYGPIPPSLGNYQHFGVYPNLTYMDFSYNNVQGELSSNWGSCKNLQYLSMSGNSIGGTIPDEIFKLNQLVELHLSSNQISGEIPQQIGNSSSLSALSLSNNKLSGLIPASIGKLSNLRKLDLSSNMLRGPIPYQIGDFSNLLSLNLSNNDLNGTIPYQIGNLAALQDLLDFSYNSLSGQIPADLSKLKNLISLNISHNNLSGSIPDSLGEMLSLSSVNISYNNLGGPIPNSGIFNSSYPVDLRNNKELCRNIQGLQPCNVSYVEPRGGSNKKKVIVAIVASLRGALLVSSLLVCIFVFGCKRRSMQQILHRREKANFRYRTYGYAAPELAYTKAVTEKCDVFSFGVLAFEILTGNHPGDLISHIQTYGAQNINFKEILDPRLSAPTKQENLKELALISNLAISCLQTNPQSRPTMRSITHMIDMEIAHDS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1058 643 PRINTS Leucine-rich repeat signature 123 136 - -
Lele29g1058 643 PRINTS Leucine-rich repeat signature 327 340 - -
Lele29g1058 643 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 528 633 - -
Lele29g1058 643 SMART LRR_typ_2 279 303 IPR003591 -
Lele29g1058 643 SMART LRR_typ_2 120 143 IPR003591 -
Lele29g1058 643 SMART LRR_typ_2 400 424 IPR003591 -
Lele29g1058 643 SMART LRR_typ_2 327 350 IPR003591 -
Lele29g1058 643 SMART LRR_typ_2 144 168 IPR003591 -
Lele29g1058 643 SMART LRR_typ_2 351 375 IPR003591 -
Lele29g1058 643 Gene3D Ribonuclease Inhibitor 27 167 IPR032675 -
Lele29g1058 643 Gene3D Ribonuclease Inhibitor 181 476 IPR032675 -
Lele29g1058 643 SUPERFAMILY L domain-like 177 465 - -
Lele29g1058 643 SUPERFAMILY L domain-like 30 224 - -
Lele29g1058 643 FunFam Leucine-rich repeat receptor-like protein kinase TDR 168 473 - -
Lele29g1058 643 Pfam Protein tyrosine and serine/threonine kinase 496 634 IPR001245 GO:0004672|GO:0006468
Lele29g1058 643 SUPERFAMILY Protein kinase-like (PK-like) 499 636 IPR011009 -
Lele29g1058 643 Pfam Leucine rich repeat 281 340 IPR001611 GO:0005515
Lele29g1058 643 FunFam Nuclear pore complex protein NUP107 28 166 - -
Lele29g1058 643 Pfam Leucine Rich Repeat 402 422 IPR001611 GO:0005515
Lele29g1058 643 Gene3D Transferase(Phosphotransferase) domain 1 496 642 - -
Lele29g1058 643 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1058 Lele-ChrLele29 8053198 8056650 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1058 102 613 Receptor kinase-like Gene Family AT4G08850 35.540 2.31e-84 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele29g1058 PK_Tyr_Ser-Thr 1e-11 CL0016