Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1057 ATGTTTCTATGTCATTTCACTTTAGGAATTACTGAATATGAAGCTCTGATCAAATGGAAGCAAAGTCTCCCACACCAACCAATATTGGATTCATGGGTCCTTCCACCTTTCAACAACTCTAAAGCAGTTCAAAGCCCATGCTCATGGCGTGGAATAACTTGTGATAATTCTACAGGAAGTGTGATCGGAATAAATTTGGCTGAAACCGGTCTTGAAGGTACCCTTCAAAACTTGAACTTCTTGGCATTTCCAAATCTTCTTCACCTTGATCTCAATACAAACAACCTCACTGGTAGCGTACCAGAAAATATTGGGGTCCTCTCTAAACTACAATTCCTTGACCTTTCTACTAATCTCCTCAATGGCACTTTACCTCTTTCTCTTGCAAATTTGACTCAAGTTTATGAACTTGATGTTTCCAGAAACCCCATAACTGGGACCTTAGACCCACGTCTTTTCCCAGATGGTTCTGATCAACCCAATATTGGATTGATTGGGATTAGAAATCTTCTCTTTCAAGACACCAAGCTGGGTGGTAGAATTCCAGATGAAATAGGGAACATAAGGAATTTAACTGTGTTAGCTCTAGATGGGAATAGCTTCTATGGCCCTATTCCTCCATCTCTTGGAAACTGTTCACATTTCGGCGTTCTTAGGTTGTCTGAAAACCAACTCTCAGGCATGATTCCTCCAAGTATTGGTAGATTGAGTAATCTATCTGATGTGCGCTTCCTCATGAATAATTTGTATGGTCCTGTTCCTCAGGAATTTGGAAATCTCTCTTCTTTAACTGTACTGCATCTTGCTGAAAACAACTTCACCGGAGAGTTGCCACCACAAAACTTGCAAGCTCTTATCTTGGCTGGAAACTCAATCAGCGGAACTATACCGGCTGACATCTGTCAATTGCATCAATTAGAAGAGCTTGATCTATCTTCCAATCAAATTTCTGGAGAGATTCCTCCCCAAATAGGGAATTTCTCCAGAATCTTTGTTCTATCTTTGAGTAGCAATAATCTGTCAGGATACATACCAACTAGCATTGAGAAGTTGTCAAATTTGCAAACTTTAGACTTGTCATCAAACATGCTAAGGGGACAAGTCCCTTCGCATATAGGGGATTGCTCAAACTTAATGCGTTTAAATTTGAGCAATAACCACTTCATTGGCAAAGTCCCCTATCAAATTGGAAATCTTAAATACTTGCAAGATTTTTTGGACTTGAGCTATAATTCCCTATGTGGAGAAATCCCTGTGGATCTCAGTAAACTCAATAGCTTGATAAGCTTGAATGTTTCTCACAATAATTTGTCAGGTCCTATCCCTAATTCCCTAACAACAATGCAAAGCTTGTCAATCCTCAATCTCTCTTACAATGTCCTAGAGGGGCCTATAAAGGAAAGTGGAATTTTCAATTATTCTAATCAAGTGGATTTGATGCACAACAAAAACTTATGTGGGAGGATCCAAGGTTTGAAACCTTGCAATGTTTCAATTTTAAAACCACTTGGAGAAGAGCTTGCATACACAATGGAAGTGACTGAGAAAGTAGATGTGTACAGCTTTGGTGTTTTGGCTATTGAGGTGCTTATGGGAGAGCATCCTGGTGATCTAATATCACGTATTCAAATGTATGGGATTAATCAAATCAGCTTCCAAGATATTCTGGACCCTCGCTTATCATCAACAAATGAGCAAAACTTGAAGAAATTGGCTTTGATTTGGTATCTTGCTCTTTCATGCTTACAAATCAACCCTCAATCTCGACCAACCATGAAAAGCGTCGCCAACAGGATTGAAATAGATATTATTCATTGA 1818 0.3916 MFLCHFTLGITEYEALIKWKQSLPHQPILDSWVLPPFNNSKAVQSPCSWRGITCDNSTGSVIGINLAETGLEGTLQNLNFLAFPNLLHLDLNTNNLTGSVPENIGVLSKLQFLDLSTNLLNGTLPLSLANLTQVYELDVSRNPITGTLDPRLFPDGSDQPNIGLIGIRNLLFQDTKLGGRIPDEIGNIRNLTVLALDGNSFYGPIPPSLGNCSHFGVLRLSENQLSGMIPPSIGRLSNLSDVRFLMNNLYGPVPQEFGNLSSLTVLHLAENNFTGELPPQNLQALILAGNSISGTIPADICQLHQLEELDLSSNQISGEIPPQIGNFSRIFVLSLSSNNLSGYIPTSIEKLSNLQTLDLSSNMLRGQVPSHIGDCSNLMRLNLSNNHFIGKVPYQIGNLKYLQDFLDLSYNSLCGEIPVDLSKLNSLISLNVSHNNLSGPIPNSLTTMQSLSILNLSYNVLEGPIKESGIFNYSNQVDLMHNKNLCGRIQGLKPCNVSILKPLGEELAYTMEVTEKVDVYSFGVLAIEVLMGEHPGDLISRIQMYGINQISFQDILDPRLSSTNEQNLKKLALIWYLALSCLQINPQSRPTMKSVANRIEIDIIH 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1057 605 Pfam Leucine rich repeat N-terminal domain 12 55 IPR013210 -
Lele29g1057 605 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 505 596 - -
Lele29g1057 605 Gene3D Ribonuclease Inhibitor 369 491 IPR032675 -
Lele29g1057 605 SUPERFAMILY Protein kinase-like (PK-like) 506 600 IPR011009 -
Lele29g1057 605 Gene3D Ribonuclease Inhibitor 157 281 IPR032675 -
Lele29g1057 605 Pfam Leucine Rich repeat 306 319 IPR001611 GO:0005515
Lele29g1057 605 Gene3D Transferase(Phosphotransferase) domain 1 492 602 - -
Lele29g1057 605 SMART LRR_sd22_2 107 133 - -
Lele29g1057 605 SMART LRR_sd22_2 303 329 - -
Lele29g1057 605 SMART LRR_sd22_2 351 377 - -
Lele29g1057 605 SUPERFAMILY L domain-like 64 148 - -
Lele29g1057 605 PRINTS Leucine-rich repeat signature 306 319 - -
Lele29g1057 605 PRINTS Leucine-rich repeat signature 351 364 - -
Lele29g1057 605 FunFam Leucine-rich repeat receptor protein kinase EMS1 181 279 - -
Lele29g1057 605 Pfam Protein tyrosine and serine/threonine kinase 506 598 IPR001245 GO:0004672|GO:0006468
Lele29g1057 605 FunFam Nuclear pore complex protein NUP107 10 153 - -
Lele29g1057 605 SMART LRR_typ_2 83 107 IPR003591 -
Lele29g1057 605 SMART LRR_typ_2 303 327 IPR003591 -
Lele29g1057 605 SMART LRR_typ_2 260 284 IPR003591 -
Lele29g1057 605 SMART LRR_typ_2 351 375 IPR003591 -
Lele29g1057 605 SMART LRR_typ_2 131 155 IPR003591 -
Lele29g1057 605 SMART LRR_typ_2 424 448 IPR003591 -
Lele29g1057 605 Gene3D Ribonuclease Inhibitor 282 368 IPR032675 -
Lele29g1057 605 Pfam Leucine Rich Repeat 426 445 IPR001611 GO:0005515
Lele29g1057 605 Gene3D Ribonuclease Inhibitor 10 156 IPR032675 -
Lele29g1057 605 SUPERFAMILY L domain-like 163 500 - -
Lele29g1057 605 FunFam Leucine-rich repeat receptor-like protein kinase TDR 280 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1057 Lele-ChrLele29 8034853 8038040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1057 4 605 Receptor kinase-like Gene Family AT4G08850 32.967 7.28e-81 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele29g1057 PK_Tyr_Ser-Thr 5.1e-06 CL0016