Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1056 ATGAACAATAACAGAACTGATGTTTACCTTGCAGTTCAAGCTACATGTGTGATTTTCTTGGCACTTTGTGTTTTAACTTCTGGAGAGACAGAAACAGAGGCCCTTCTCAAGTGGAAACAGAGTCTTCCAAATCAACCAATTCTGGAGTCATGGGTCTCAAGTGCAGCTCAAAGCCCATGTTCATGGCGTGGAATAACATGTGATAATTCCTCAGGAAGTGTGATTGCAATAAACTTGGCTTATACTAGTCTTGAAGGTACCCTCCAAAACTTGAACTTCTCTGCATTTCCAAATCTTCTCCGCCTCGATCTCAAAACAAACAACCTCGTCGGTAGCATACCAGAAAACATTGGTGTGCTTTCTAAACTGCAATTCCTTGACCTTTCTACAAATAGCCTCAATGGCACTTTACCTCTTTCTCTTGCTAATTTGACTCAAGTTTATGAGCTCGATGTTTCACGAAACAGCATCACCGGGATATTAGACCCTCGTCTTTTTCCTGATGGTTCTGATCCACCCAAGATAGGATTGATAGGAATCAGAAGACTTCTCTTTCAGGACAACCTGCTTGGTGGTATAATTCCAAATGAAATAGGGAATATAAGAAATTTAACTGTGTTAGCATTAGATGGGAATAGCTTCTATGGTCCTATTCCCCCGTCTCTAGGGAATTGTACCCATTTAAATGTTCTTAGGATGTCTGGAAACAAGCTCTCAGGCATGATTCCTCCTAGTTTTGGTAGATTGACTAATCTATCTGAGGTGTTCCTCCACATAAATTATTTACAGGGTCCTGTTCCACAAGACTTAGGAAACGCTTCTTCTTTAACTGTCCTACATCTTGCTGAAAACAACTTCACCGGAGAGTTACCGTCCCAAGTTTGCAACGGTGGCAAGCTTGTGAATTTCAGTGCTTCATACAATAGTTTCACTGGCCCAATCCCAATAAGCCTGAGAGATTGCACATCCTTGTATAGGATTCGGTTGGAATATAACCAATTAAGGGGTTATGCAGATCAAGATTTTGGTGTGTATCCTAATCTTACTTACATAGACTTCAGCTACAATAACGTGCAAGGTGAGCTCTCTTCAAATTGGGGAAGCTGCAAAAACTTGCAATATCTTAGTATGTCTGGAAACTCAATAGGCGGTACTATACCTGATGAGATTTTTAAACTGAATCAACTTGTAGAGCTACATCTGTCTTCCAATCAAATATCAGGAGAGATTCCCCAACAAATAGGGAATTCCTCTAGCCTTTCCGATCTATCATTGAGTAACAACAAACTTTCAGGATTGATACCGGCAAGCATTGGGAAGTTGTCGAATTTGCGAAAATTAGACTTATCATCAAACATGCTAAGAGGACCAATCCCTTATCAGATAGGGGATTTCTCAAACTTGCTGAGTTTAAATTTGAGCAATAATGACTTGAATGGAACAATCCCATACCAAATTGGAAATCTGGCTGCCTTACAAGATTTGTTGGATTTCAGTTACAATTCACTTTCTGGCCAAATTCCAGCTGATCTTAGCAAGCTGAAAAAATTGATAAGCTTGAATATCTCTCACAACAATCTTTCTGGTTCTATCCCTGATTCCCTTGGTGAAATGTTGAGTTTGTCAAGTGTCAACATCTCCTACAACAATTTGGAGGGTCCTATACCGAATAGTGGCATATTTAATTCTTCCTATCCCGTCGATTTGCGTAACAACAAAGGGTTATGCGGGAATATACAAGGGCTGCAACCTTGCAATGTCTCGTCCATGGAACCTAGAGGAGGAAGCAACAAAAAGAAAGTTATTGTAGCCGTTGTTGCTTCTTTGGGAGGTGCACTACTTGTTTCGTCATTGTTAGTTTGCATTTTTGTTTTTGGCTGTAAGAGAAGATCTATGCAACAGAATTCTGCACCGGAGAGAAAAAGCCAATTTTCGATATCGTATTTCAATGGAAGAATTGTTTATGAAGACATAATTGAAGCCACTAAGAACTTCAATGACACCTACTGCATTGGAGAGGGAACATCAGGAAAAGTTTACAGAGTGGTGCTGCCAGGAGGTCAAGTAGTTGCTATAAAAAAGTTAAGATGTGAGGAAGACAACTTAGACATTGAAAGCATAAAATCCTTTAAAAGTGAGATAGAAGCCATGACCGAAACACGTCACCGGAACATTGTGAAGTTGTATGGGTTTTTCTCAGACCCCTCGCACACATTTTTGATTTATGAGTACATGGAAAGAGGGAATTTAAATTATATTCTGAGAGATGACGAAAAAGCTACTGAACTAGATTGGCCAAAGAGAGTTGGAATTGTTAAAGGAGTAGCACTCGCTTTATCTTACATGCATCATGATTGCAATCCACCAATAATCCACAGAGACATATCAAGCAAGAATGTATTATTGTCCAAAAGTTTGGAAGCTCATGTTTCAGATTTTGGCACAGCAAGGTTCCTGAAGGCAGATTCACGTATTTGGACTTCCTTTGCAGGCACATATGGCTATGCAGCTCCAGAGCTTGCATACACAAAGGCAGTGACTGAAAAATGTGATGTGTTTAGCTTCGGTGTTTTGGCTTTTGAGATTCTCACAGGAAATCATCCAGGAGATCTAATTTCTCACATACAAACATATGGTGTTCAAAACATCAACTTCAAAGAGATTTTAGACCCACGTCTTTCACCTCCTACGAAGCAAGAAAAATTGAAGGAATTGGCTTTGATTAGTAATCTGGCTATTTCTTGTTTACAGACAAACCCTCAATCACGACCAACTATGCGAAGTATAACTCACATGATTGACATGGAGATAGCTCATGATTCATGA 2826 0.397 MNNNRTDVYLAVQATCVIFLALCVLTSGETETEALLKWKQSLPNQPILESWVSSAAQSPCSWRGITCDNSSGSVIAINLAYTSLEGTLQNLNFSAFPNLLRLDLKTNNLVGSIPENIGVLSKLQFLDLSTNSLNGTLPLSLANLTQVYELDVSRNSITGILDPRLFPDGSDPPKIGLIGIRRLLFQDNLLGGIIPNEIGNIRNLTVLALDGNSFYGPIPPSLGNCTHLNVLRMSGNKLSGMIPPSFGRLTNLSEVFLHINYLQGPVPQDLGNASSLTVLHLAENNFTGELPSQVCNGGKLVNFSASYNSFTGPIPISLRDCTSLYRIRLEYNQLRGYADQDFGVYPNLTYIDFSYNNVQGELSSNWGSCKNLQYLSMSGNSIGGTIPDEIFKLNQLVELHLSSNQISGEIPQQIGNSSSLSDLSLSNNKLSGLIPASIGKLSNLRKLDLSSNMLRGPIPYQIGDFSNLLSLNLSNNDLNGTIPYQIGNLAALQDLLDFSYNSLSGQIPADLSKLKKLISLNISHNNLSGSIPDSLGEMLSLSSVNISYNNLEGPIPNSGIFNSSYPVDLRNNKGLCGNIQGLQPCNVSSMEPRGGSNKKKVIVAVVASLGGALLVSSLLVCIFVFGCKRRSMQQNSAPERKSQFSISYFNGRIVYEDIIEATKNFNDTYCIGEGTSGKVYRVVLPGGQVVAIKKLRCEEDNLDIESIKSFKSEIEAMTETRHRNIVKLYGFFSDPSHTFLIYEYMERGNLNYILRDDEKATELDWPKRVGIVKGVALALSYMHHDCNPPIIHRDISSKNVLLSKSLEAHVSDFGTARFLKADSRIWTSFAGTYGYAAPELAYTKAVTEKCDVFSFGVLAFEILTGNHPGDLISHIQTYGVQNINFKEILDPRLSPPTKQEKLKELALISNLAISCLQTNPQSRPTMRSITHMIDMEIAHDS 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1056 941 FunFam MDIS1-interacting receptor like kinase 2 745 939 - -
Lele29g1056 941 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Lele29g1056 941 Pfam Leucine Rich Repeat 516 536 IPR001611 GO:0005515
Lele29g1056 941 Gene3D Ribonuclease Inhibitor 109 167 IPR032675 -
Lele29g1056 941 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 273 589 - -
Lele29g1056 941 Pfam Protein kinase domain 669 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1056 941 ProSitePatterns Tyrosine protein kinases specific active-site signature. 790 802 IPR008266 GO:0004672|GO:0006468
Lele29g1056 941 ProSitePatterns Protein kinases ATP-binding region signature. 671 694 IPR017441 GO:0005524
Lele29g1056 941 PANTHER LEUCINE RICH REPEAT KINASE 2 222 935 - -
Lele29g1056 941 Gene3D Ribonuclease Inhibitor 23 108 IPR032675 -
Lele29g1056 941 SMART serkin_6 665 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1056 941 SMART LRR_typ_2 393 417 IPR003591 -
Lele29g1056 941 SMART LRR_typ_2 274 297 IPR003591 -
Lele29g1056 941 SMART LRR_typ_2 441 464 IPR003591 -
Lele29g1056 941 SMART LRR_typ_2 514 538 IPR003591 -
Lele29g1056 941 SMART LRR_typ_2 144 168 IPR003591 -
Lele29g1056 941 SMART LRR_typ_2 120 143 IPR003591 -
Lele29g1056 941 SMART LRR_typ_2 465 489 IPR003591 -
Lele29g1056 941 PRINTS Leucine-rich repeat signature 123 136 - -
Lele29g1056 941 PRINTS Leucine-rich repeat signature 441 454 - -
Lele29g1056 941 Gene3D Transferase(Phosphotransferase) domain 1 745 940 - -
Lele29g1056 941 FunFam Nuclear pore complex protein NUP107 28 166 - -
Lele29g1056 941 FunFam Leucine-rich repeat receptor protein kinase EMS1 172 269 - -
Lele29g1056 941 FunFam Leucine-rich repeat receptor protein kinase MSP1 628 744 - -
Lele29g1056 941 Gene3D Ribonuclease Inhibitor 168 298 IPR032675 -
Lele29g1056 941 Gene3D Ribonuclease Inhibitor 299 588 IPR032675 -
Lele29g1056 941 ProSiteProfiles Protein kinase domain profile. 665 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g1056 941 SUPERFAMILY RNI-like 241 557 - -
Lele29g1056 941 Gene3D Phosphorylase Kinase; domain 1 626 744 - -
Lele29g1056 941 SUPERFAMILY RNI-like 71 267 - -
Lele29g1056 941 SUPERFAMILY Protein kinase-like (PK-like) 641 932 IPR011009 -
Lele29g1056 941 Pfam Leucine rich repeat 395 454 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1056 Lele-ChrLele29 7986707 7990178 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1056 7 838 Receptor kinase-like Gene Family AT4G08850 40.880 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele29g1056 Pkinase 2.4e-49 CL0016