Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1042 ATGGCGACGAAGCTCATGCTAGCGATTCAGTACGATAGCTATGGCGGTGGCCCCGCCGGTTTGAAGCATGTTGAGATTCCAGTTCCCACTCCAAAGAAAAATGAGGTTTTGGTGAAAGTGGAAGCAACTAGTCTGAATGCATTTGATTGGAAGATTCAAAAGGGCGTAGCACGGCCCCTGTTACCACGAAAGTTCCCCTATATCCCTGGAACTGACATAGCGGGAGAGATAGTAGAGGTTGGACCACAAGTCAAAGATTTTAAAGCTGGTGACAAAGTTGTTGCTTTTCTTGCTCATGATCATGGAGGTGGACTAGCAGAGTTTGCTGTGGCTCCTGAGAGCTTAACAGTTTTGAGACCACATCAAGTCTCAGCTGCTGAAGCTGCAGCTTTAACTCTGGCTGGGCTAACGGCTTATCAGCCCCTAACTGAAGTTGCTGGAGTCAAGCTTGATGGAACTGGTGAACCAAAAAAGAACATCTTAGTAACTGCAGCCTCAAGCGGCGTGGGTCACTACGCAGTTCAACTGGCAAAGCTGGGTAACACCTTCGTAACCGCCACTTGTGGGGCCCGCAACATCGACTTCGTCAAGAGCTTAGGCGCTGATGAGGTTCTTGACTACAAGACTCCAGAAGGAGATGCTCTGAAGAGTCCATCTGGTAAAAAATACGATTCAGTGATACATTGCGCGTATTCTGGAATACCATGGTCAACTTTTGAGCCTCAATTGAGTGATCATGGGAAGTTCATAGACTTAACGCCCGGCTTGAGTTCATTCGCGACTTGTGCGCTGAAGAAACTCACATTCTCTAAGAAGAAGCTCGTGCCATTCTTTGCAACACCCAAGAAAGAGAACCTGAGTTACCTGGTTGAATTGCTGAAAGATGGAAGGCTTAAATCTGTTATTGACTCTCGCTTTCCTCTGAGTAAAGCTGAAGATGCTTGGGCTAAGAGCATCGATGGCCATGCTACTGGAAAAATCATTGTGGAGCCATAG 996 0.4719 MATKLMLAIQYDSYGGGPAGLKHVEIPVPTPKKNEVLVKVEATSLNAFDWKIQKGVARPLLPRKFPYIPGTDIAGEIVEVGPQVKDFKAGDKVVAFLAHDHGGGLAEFAVAPESLTVLRPHQVSAAEAAALTLAGLTAYQPLTEVAGVKLDGTGEPKKNILVTAASSGVGHYAVQLAKLGNTFVTATCGARNIDFVKSLGADEVLDYKTPEGDALKSPSGKKYDSVIHCAYSGIPWSTFEPQLSDHGKFIDLTPGLSSFATCALKKLTFSKKKLVPFFATPKKENLSYLVELLKDGRLKSVIDSRFPLSKAEDAWAKSIDGHATGKIIVEP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1042 331 SUPERFAMILY GroES-like 5 148 IPR011032 -
Lele29g1042 331 Pfam Zinc-binding dehydrogenase 199 329 - -
Lele29g1042 331 SMART PKS_ER_names_mod 16 329 IPR020843 GO:0016491
Lele29g1042 331 Pfam Alcohol dehydrogenase GroES-like domain 34 95 IPR013154 -
Lele29g1042 331 Gene3D - 13 329 - -
Lele29g1042 331 CDD MDR1 9 329 - -
Lele29g1042 331 PANTHER ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN C16A3.02C 4 330 - -
Lele29g1042 331 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 123 253 IPR036291 -
Lele29g1042 331 Gene3D - 142 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1042 Lele-ChrLele29 7787610 7792130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1042 65 220 Monolignol Biosynthesis Gene Families AT4G37980 29.688 2.66e-08 52.8