Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1036 ATGCTGCAAAGTTCTAACAGGCACTTGATGGGTGATGCCTTGAGCACTCTGAATGTGAAGGAACTTAAGCAGCTTGAGAATAGACTTGAACGGGGCCTCTCTAGAATCAGGTCCAAAAAGGAGGTTGAACTTGGAAATGAAAACCTTTGTATTCGGTCTAAGATAGCAGAAGTAGAGAGGGCAGAAGAAGAGATGGTATCAGCATCATCAGGAGGGCAAGAGCTGAGTGCCATTCATGCTTTGGCTTCTAGAAATTACTTCATGGATACTAATCCATCTCCTTACACTCCTCCTACAACTGACCACAAGAATCTTCGCCTTGGGCTTCTCCCCGTTCCCAATATTCACGTACATATTCCTGGAGTCGCTTCTGTGTTATCCACCCTATATTCTTTGAGCAACCTGAATTTATATCACATGGGTGGAAGTTCTATAGATGATGATTGGGAGCTTACTGCCTCTACTATTGAGGCCCGAACAGTGGTCTTGGTTGGACGAACTGGTAATGGAAAAAGTGCAACAGGTAATAGTGTTCTTGGAAAGAAGGCCTTCAAGTCAAGGGCAAGTTCATCAGGTGTAACAAGTACTTGTGAATTGCAAAGTACTATACTCAAAGATGGTCAAATTGTGAATGTTATTGACACCCCAGGATTATTTGATTTTGCTGTGGGATCTGACTTTGTTGGGAAGGAAATTGTAAAATGCATTGATCTAGCCAAAGAAGGGATTCATGCCATCCTTGTAGTGTTCTCTGTTAGAACTCGCTTTTCTCAAGAAGAACAAGCTGCTCTTCGTAACTTACAAACATTGTTTGGAAACAAAATAGTTGATTACATGATTGTGGTCTTCACTGGAGGGGATGAACTGGAAGACAATGATGAGACTTTGGAAGATTATTTAGGTCGTGAGTGCCCAGAGCCTTTAAAGGAAATTCTTGTTTTGTGCAAAAATCGGTATGTGCTTTTTGATAACAAGACTAAGGATGAAAGAAAGAAGTTTGAACAAGTTCAGCAACTTATTTCTCTTGTAAACATGGTCATTGCACAGAATGGTGGAAAACCTTATATGGATGAGTTATTCACTGAACTGAAGAAAGGAGCAATGAAGCTGCATAACCAACAAATAGAGGTTGATGCCTTAGAAGGATATACAAAAAGTGAGATAAAGGAGATGAAGGAACATTTGCATCGGACTTATGATGAGCAACTAAAACGAATTACTGAGATGGTGGAGACAAAGTTGAGGGAAGCAACTACCAGGCTTGAACAACAATTGGCTGAAGAGCAAGCTGCAAGGCTTAAGGCAGAGGAGAATGCATTTTTAGCTCAGAAGAGATCAGATGATGAAATTCGAAAACTTAGAGAAAATCTGGAGATGGCACGTGAAGAACTCCGTAAACGAGGCGAGCACCGTTGCAACATTTTGTGA 1428 0.4111 MLQSSNRHLMGDALSTLNVKELKQLENRLERGLSRIRSKKEVELGNENLCIRSKIAEVERAEEEMVSASSGGQELSAIHALASRNYFMDTNPSPYTPPTTDHKNLRLGLLPVPNIHVHIPGVASVLSTLYSLSNLNLYHMGGSSIDDDWELTASTIEARTVVLVGRTGNGKSATGNSVLGKKAFKSRASSSGVTSTCELQSTILKDGQIVNVIDTPGLFDFAVGSDFVGKEIVKCIDLAKEGIHAILVVFSVRTRFSQEEQAALRNLQTLFGNKIVDYMIVVFTGGDELEDNDETLEDYLGRECPEPLKEILVLCKNRYVLFDNKTKDERKKFEQVQQLISLVNMVIAQNGGKPYMDELFTELKKGAMKLHNQQIEVDALEGYTKSEIKEMKEHLHRTYDEQLKRITEMVETKLREATTRLEQQLAEEQAARLKAEENAFLAQKRSDDEIRKLRENLEMAREELRKRGEHRCNIL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1036 475 Coils Coil 19 42 - -
Lele29g1036 475 ProSiteProfiles AIG1-type G domain profile. 156 364 IPR006703 GO:0005525
Lele29g1036 475 Coils Coil 443 470 - -
Lele29g1036 475 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 160 463 IPR045058 -
Lele29g1036 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 332 IPR027417 -
Lele29g1036 475 FunFam Immune-associated nucleotide-binding protein 9 158 375 - -
Lele29g1036 475 Pfam K-box region 2 63 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele29g1036 475 CDD AIG1 159 365 - -
Lele29g1036 475 Pfam AIG1 family 159 373 IPR006703 GO:0005525
Lele29g1036 475 ProSiteProfiles K-box domain profile. 1 81 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele29g1036 475 Coils Coil 414 438 - -
Lele29g1036 475 Gene3D - 159 373 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1036 Lele-ChrLele29 7688306 7701917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1036 2 87 MADS-box Gene Family AT4G09960 55.340 3.93e-25 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1036 29 7688306 7701917 Lele31g0501 31 13055514 13059813 hybridization
Lele29g1036 29 7688306 7701917 Lele32g0993 32 6893313 6898049 hybridization