Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0996 ATGAGTTGCAGCTCCGGCGACAACAATGGAAGCCGCATCACCAACAGGGATAGCGCCGTCAAGTACAAGGGAGTCCGGCAAAGGAAATGGGGCAAGTGGGTATCGGAGATTCGAGTCCCGGGGTCACAAGAGCGACTGTGGTTGGGCACATATGCGTCGCCGGAGGCGGCAGCAGTGGCTCACGACGTGGCTTTCTACTGCCTGAGGAGACCAGCGACATTGGAGAAGCTCAACCTCCCGGAGATGTTGCCTTCTTGTTATGTCTCGCAGCAGCGAGAAATGTCGCCGAGGACGGTTCAGGCGGAGGCTTCAAATGCCGGCATGGCCGTTGATGCCCAGAGGATTGTTGAAGCAGAAGAGAAGAATGAGAAAACAGAGGAGCACAGAGAAAACAGAGACATGAATGACGATGGGTTTTGGTGGGACTGGAATGGTGACGACAGCAGCAGCAGCGGAGCTGGCGGCGGCCGTTTCTGGCAAGGAATTGCCGAAGGTTGTACACAAGGAGAAGAATCGAGCATCTCCGTTGATGATTATTTTCAGGATCTTCAACATTGTTAG 561 0.5437 MSCSSGDNNGSRITNRDSAVKYKGVRQRKWGKWVSEIRVPGSQERLWLGTYASPEAAAVAHDVAFYCLRRPATLEKLNLPEMLPSCYVSQQREMSPRTVQAEASNAGMAVDAQRIVEAEEKNEKTEEHRENRDMNDDGFWWDWNGDDSSSSGAGGGRFWQGIAEGCTQGEESSISVDDYFQDLQHC 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0996 186 ProSiteProfiles AP2/ERF domain profile. 21 80 IPR001471 GO:0003700|GO:0006355
Lele29g0996 186 Coils Coil 115 135 - -
Lele29g0996 186 CDD AP2 21 81 IPR001471 GO:0003700|GO:0006355
Lele29g0996 186 SMART rav1_2 21 86 IPR001471 GO:0003700|GO:0006355
Lele29g0996 186 SUPERFAMILY DNA-binding domain 21 74 IPR016177 GO:0003677
Lele29g0996 186 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Lele29g0996 186 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Lele29g0996 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 128 - -
Lele29g0996 186 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Lele29g0996 186 Gene3D AP2/ERF domain 20 81 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0996 Lele-ChrLele29 7384484 7385044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0996 17 122 AP2-EREBP Transcription Factor Family AT1G22810 58.491 7.05e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele29g0996 AP2 5.5e-11 CL0081