Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0993 ATGGGGTGCCTCTGCTCAAAAGACAAGAATGAAGTTGATGAATATGATAAAGAAGAAGACTTAACCAAGTCTTCATCAGTACAACTGGTGGCTCCTGCCCTCTCAACAGCACATTTGGGTGGTGGTGCGGACACTGATGGTTCAGTGAATAGGTTGCTTAAGAAATATTCATATACAAATGTAAACAACCACATCGTAGTTGATGTAAAACCGATAAAAGGCCAACCTCAGAGATGTGCTAGTGTTGGGGAAGGAAAGGGATCAATGTCTCGAATGCTTAGCATGTCACGGGGTCCAGAAGGAGAACATGTTGCTGCAGGATGGCCGTTGTGGTTATCTTCAGTAGCAGGAGATGCCATCAAAGGGTGGGTTCCTCGACGGATAGACTCTTTCGACAAGTTAGGCCAAGTGGGGCAAGGTGCTTATAGCAGTGTACATAAGGCTCGTGATCTTCAAACTGGTAAAATTGTGGCATTGAAGAAAGTGCGTTTTTCACCTTCAGATGCTGAAAGTGTTCGGTTTATGGCTAGGGAAATATATATTTTGCGTCAGCTTGACCATCCAAATGTCATAAAGCTCGAGGCTATAGTGACATCAAAGACGTCCAGCAGCTTGTATCTTGTCTTTGAGTACATGGAACATGACCTTACTGGACTACAAGCATTGCCTGGGATGAAGTTCACTGAACCTCAGATAAAATGTTATATGCAGCAATTGTTTTGTGGGCTTGAACACTGCCATAGTCGTGGTGTGCTACACCGTGACATCAAGGGTTCAAATCTACTGCTTAACAGTGATGGAAATCTTAAGATTGCAGACTTTGGTCTTTCAACTATTTACCAAACAGATAAAAAGGAGCCACTGACTAGCCGTGTAGTGACTCTGTGGTATAGGCCGCCTGAGCTTTTACTTGGTGCTACAGATTATGGACCTGCAATTGACTTGTGGAGTGCTGGTTGCATTCTAGCAGAATTGCTGTTTGGGAAGCCTATTATGCCAGGAAGAACAGAGGTAGAACAAATGCATAAGATTTTTAAGCTTTGTGGTTCCCCATCTGAAGATTTTTGGCAGAAAACAAAATTGCCCCATGCAACAAGTTTTAAACCTCAGCAACGATACAGACGCCGTGTTTCTGAAACATTTAGAGACTTTTCTCCTTCAGCCTTGGCTCTTGTTGAAAATCTCCTTGCAATAGAACCAGAAGATCGAGGTTCAGCAACTTCTGCTCTTCAGAGTGAGTTCTTCACAACACCGCCCCCACCTTGTGATCCATCAAGTTTACCCAAGTTTCCTCCTAGCAAGGAGTTTGATGCCAAGCTTAGAGATGAAGAAGCAAGAAGGGAAAACACTGAAGCTGTAAAAATTCATGGACCAGTGTCTGTTGCAAGAGATACAAATGCTCTACAAACGCCAGATTACAACGCTCAAGGAAATAAATCTGTACAGGTTAATTCAAATACAAAAAAGTCTGGTGACAAATATAACTCCAGTGAGGATGGTAGTTCCAAAAATATTGTGCCAGCCAGAGGATCTGTACAAAACGGTCATGATCATCCCACTTGGGCTAAGCAAACCGCTGCAACAGGATCACCGTTGAACAAGAAATCAGACTTCAGGGGGAAGAATACAGAGTTAAGGACACAGAGATCTAATGTAAACCAGGCAGCAGCAGATTTTTCTAACTCTCATCTAAACAAGGGTTACGTGCCAAACAAAAATAGGATGCACCACTCTGGACCATTGGTGCCACCTGGAGGTAACATCGATGACATGCTCCGAGAGCACGAGAGATTAATGCAAGAGGCATTCCGTACAGTCAAGGACAAGAACAACCATAAAAAATACTGACTTGTTGCTGGATATGTTGTTGATTAA 1875 0.4315 MGCLCSKDKNEVDEYDKEEDLTKSSSVQLVAPALSTAHLGGGADTDGSVNRLLKKYSYTNVNNHIVVDVKPIKGQPQRCASVGEGKGSMSRMLSMSRGPEGEHVAAGWPLWLSSVAGDAIKGWVPRRIDSFDKLGQVGQGAYSSVHKARDLQTGKIVALKKVRFSPSDAESVRFMAREIYILRQLDHPNVIKLEAIVTSKTSSSLYLVFEYMEHDLTGLQALPGMKFTEPQIKCYMQQLFCGLEHCHSRGVLHRDIKGSNLLLNSDGNLKIADFGLSTIYQTDKKEPLTSRVVTLWYRPPELLLGATDYGPAIDLWSAGCILAELLFGKPIMPGRTEVEQMHKIFKLCGSPSEDFWQKTKLPHATSFKPQQRYRRRVSETFRDFSPSALALVENLLAIEPEDRGSATSALQSEFFTTPPPPCDPSSLPKFPPSKEFDAKLRDEEARRENTEAVKIHGPVSVARDTNALQTPDYNAQGNKSVQVNSNTKKSGDKYNSSEDGSSKNIVPARGSVQNGHDHPTWAKQTAATGSPLNKKSDFRGKNTELRTQRSNVNQAAADFSNSHLNKGYVPNKNRMHHSGPLVPPGGNIDDMLREHERLMQEAFRTVKDKNNHKKYXLVAGYVVD 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0993 624 MobiDBLite consensus disorder prediction 463 509 - -
Lele29g0993 624 MobiDBLite consensus disorder prediction 412 543 - -
Lele29g0993 624 PANTHER CELL DIVISION PROTEIN KINASE 129 419 - -
Lele29g0993 624 Gene3D Phosphorylase Kinase; domain 1 125 218 - -
Lele29g0993 624 Gene3D Transferase(Phosphotransferase) domain 1 219 455 - -
Lele29g0993 624 MobiDBLite consensus disorder prediction 434 453 - -
Lele29g0993 624 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0993 624 MobiDBLite consensus disorder prediction 517 536 - -
Lele29g0993 624 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Lele29g0993 624 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0993 624 CDD STKc_CDK9_like 131 415 - -
Lele29g0993 624 MobiDBLite consensus disorder prediction 562 589 - -
Lele29g0993 624 Pfam Protein kinase domain 132 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0993 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Lele29g0993 624 SUPERFAMILY Protein kinase-like (PK-like) 124 423 IPR011009 -
Lele29g0993 624 FunFam probable serine/threonine-protein kinase At1g54610 214 455 - -
Lele29g0993 624 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0993 Lele-ChrLele29 7368238 7372738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0993 123 454 Core Cell Cycle Gene Families AT5G10270 53.161 2.35e-122 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele29g0993 Pkinase 1.7e-69 CL0016