Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0966 ATGTACAGAAGGCTTCGAAGGTTTGAGTCTGGTGTGACATCAGAGGCATCAAACAAAACAAGAGCATCTAAAGTAGTTTCTGGATGTGGAAGAGATCAGAAAGAAACAACAGGCAAAGATATTTTGAGCAAACTGAGGAAAGTAAATTTGGCAGATCAAGAATGGGTCAATAAGATTCCAGAGTGTCCATTGTTCTTCCCATCGGAACAAGAGTTTGAGGATCCTTTAGTTTATCTGCAGAAGATTTTCCCTCAGGCACAAAAATATGGAATGTGCAAAATTGTTTCTCCCCTAAATGCCTCTATTCCAGCTGCTGTTGTCTTAATGAAAGAGATGGAAAAGTTCAAGTTTGAAACTATTGTACAACCTCTTCGGTTTTCTGAATTGAAAGAGGTCAATGAAACAATCTATTCTCTTAAGGGCAGAAAATACACTTACCGTGATTTCGAGACTTTGGCGAACAGGGCCTTTCTCAGTCGGTTTTACAGTTCAGGAAGTCTTCCTTCTTCATATGTGGAAAAGTTGTTCTGGCATGAGATGGAGCATGGAGATCAGATGGGAACAGTTGAGTATGGAGTCAATGTTGAAGGTAGTGCTTTTTCATGTGATCCTAATGACAAGCTTGCAAAAAGTAAATGGAATTTGAAGAATTTCTCGCGGCTGCAGAAATCTACATTGCGGTTCATTGACAAAGAGATTCCAGGAGTAACTGATCCTATGCTTTATATTGGAATGCTATTCAGCATGTTTGCATGGCATGTAGAAGATCACTATTTGTACAGCATTAACTATCATCACTCAGGAGCAAATAAAACTTGGTACGGCGTTCCCAGCTATGCAGCGTCTCGATTGGAAGAGGTTTCCTTAGAACATGTGTTCCATAATAAGATTTTATCATCAAAACATGATGGAGAGGCTGGTGTTTTCCAAGCTCTTGCTCAGAAAACAACCATGTTTTCTCCAAATGTCTTGCTCCAACATGGTGTGCCAGTTTACAAGGTTGTGCAGAAGCCTGGAGAATTTGTCATCACCTTTCCTAGATCATATCATGCTGGATTCAGTCATGGATTCAACTGTGGAGAAGCAGTAAACTTTGCAGTGAGTGATTGGTTTCCATTAGGGGCTGAAGCTACAAGGCTTTATGCACACCTTGGAATGATGCCTATTATTCCCTTTGAGGAACTTCTTTGCAATGAGGCAATGCTAATTTACAAGGCCCCAAATCATCTCAAAGGCTCCAATAATAACAAACTCGATTTGGAATCCGACCATGCTATAAAGCTATCTTTTATGCAGCTCATACGATCTTATGACAAGGCCCTTTCAAGACTGGAAAAAAGTTCAACACAGTGTTCAATAAGTTCTTCAAATTCTCTAGGTACTGTTGTATGCAGCCTCTGCTGTAGAGACTGTTATGTGGCTTTCTTGCTCTGCAAGTATTGCAATTCTCAACCCATTTGTATTTTCCATTATGAAATTGAGACTCAAAATTGCTCTTGTGGTAGAAAATGTACACTTTTCAAAAGAGATGAAATGTTGGAACTGATGGATGCTGCTACAAGTTTTGAGGGAGAAAAAGATATTTTGTTGGAAGTTCAAAGACATAGTGGAGCAAATATACTGCCAAAGACATTATTTTATACTGATCAAGAAAGCATTCAAGATAATAATAAGAATTTGGGAACTGCAGAACAGAACAATCATTGCCATGAAGAAGGAATTACCAGTGGACCTGTTTCTTCTGTAGAGAGAGAATCAAGTTCAAAAATAAGAGAAGAGGACTTTATTGAGCTCAACTTGGAAGATAATAAGCGGCAAGTGCTGAAAATTTGTAGAAAGAGAAGGCCCCTAACAGTGATAGATGAGAAGGAAGCTCAAATGAAGCTTAAATTACAAAGAAATGACTCAAATTTGACTCTAACCACTCCAACAGAATCTTCCCCAGCTTGA 1950 0.3897 MYRRLRRFESGVTSEASNKTRASKVVSGCGRDQKETTGKDILSKLRKVNLADQEWVNKIPECPLFFPSEQEFEDPLVYLQKIFPQAQKYGMCKIVSPLNASIPAAVVLMKEMEKFKFETIVQPLRFSELKEVNETIYSLKGRKYTYRDFETLANRAFLSRFYSSGSLPSSYVEKLFWHEMEHGDQMGTVEYGVNVEGSAFSCDPNDKLAKSKWNLKNFSRLQKSTLRFIDKEIPGVTDPMLYIGMLFSMFAWHVEDHYLYSINYHHSGANKTWYGVPSYAASRLEEVSLEHVFHNKILSSKHDGEAGVFQALAQKTTMFSPNVLLQHGVPVYKVVQKPGEFVITFPRSYHAGFSHGFNCGEAVNFAVSDWFPLGAEATRLYAHLGMMPIIPFEELLCNEAMLIYKAPNHLKGSNNNKLDLESDHAIKLSFMQLIRSYDKALSRLEKSSTQCSISSSNSLGTVVCSLCCRDCYVAFLLCKYCNSQPICIFHYEIETQNCSCGRKCTLFKRDEMLELMDAATSFEGEKDILLEVQRHSGANILPKTLFYTDQESIQDNNKNLGTAEQNNHCHEEGITSGPVSSVERESSSKIREEDFIELNLEDNKRQVLKICRKRRPLTVIDEKEAQMKLKLQRNDSNLTLTTPTESSPA 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0966 649 SUPERFAMILY Clavaminate synthase-like 156 403 - -
Lele29g0966 649 MobiDBLite consensus disorder prediction 568 584 - -
Lele29g0966 649 ProSiteProfiles JmjN domain profile. 62 103 IPR003349 -
Lele29g0966 649 PANTHER LYSINE-SPECIFIC DEMETHYLASE 54 549 - -
Lele29g0966 649 Gene3D Cupin 62 428 - -
Lele29g0966 649 Pfam jmjN domain 63 95 IPR003349 -
Lele29g0966 649 ProSiteProfiles JmjC domain profile. 207 382 IPR003347 -
Lele29g0966 649 Pfam JmjC domain, hydroxylase 240 365 IPR003347 -
Lele29g0966 649 MobiDBLite consensus disorder prediction 568 587 - -
Lele29g0966 649 SMART cupin_9 207 382 IPR003347 -
Lele29g0966 649 SMART JmjN_1 61 102 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0966 Lele-ChrLele29 7068672 7084941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0966 59 529 JUMONJI Transcription Factor Family AT2G34880 31.835 2.69e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele29g0966 JmjC 1.5e-39 CL0029