Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0959 ATGGTAAGAAGAAATGGAGGAAGGTCACTGCATCAAATTCTTCGTCGTCGCCTTGAGTCCTGCAAATCCAAGTACTCAACTATTGATGAAATTGTAAACCATCTTCGCGAAAATTACCCTGATTACCAGCGAACAAAACAACAAACTTTGACTCGATTTGTTCAAGAAGCTTTGGAGTCATCTAACCATGGGAACAACAGAAAGCCCAATACTTCCATATTGAAGCCTGACACGTCAGAATATAATGATGAAGATGAAGAAGAGGGTCGAAGTGCATCTCGAAAGAGGCGCAAGAAAGTTGATGAAAGTGAAGAGATTGCAAAAAATGGAGAATTTACACCTTCAAAGAGTGATGGCGAATATGGGACAGTGTCTACATCAGAGGATGCAATTTACGAGGAGAAAGTGGAACCAGCCTTTGACTTGATGAAAACAATGTTGCGGGCTTCATACTCAGAAACAAAGAATGTGAAATCTAAGGCAGAGGAGAAAAACGTTGAACTGGAGTTGAGTAATAATAATAAGGCAACTAAGATTGATGCCATGAATGGGTTTGGAGGTAACATGAAAGAGGATTTGGAACCGGAAAGGCAATTGAGAGGTTCAGTTTCGAATGTCAGGGGTGATGTTGAGGTCAAGGGGAAGGGTGGACCTAGATTCAAAGATTTGGGTGGGATGAAGAAGGTGCTGGAGGAATTGAAGATGGAAGTAATTGTTCCACTTTATCATCCACAGTTGCCAAGAAAGTTAGGGGTGAGGCCGATGGCAGGGATTTTGTTACATGGACCCCCAGGGTGTGGGAAAACCACTCTGGCTCTTGCTATAGCTAATGAGACTGGTTTTCCGTTTTATCAGATATCAGCTACAGAGGTGGTTTCCGGAGTTTCAGGAGCGTCTGAAGAAAACATTAGAGAGCTTTTTTCTAAAGCATACAAGACTGCCCCATCAATTGTGTTTATTGATGAGATTGATGCAATTGCTTCATAA 987 0.4195 MVRRNGGRSLHQILRRRLESCKSKYSTIDEIVNHLRENYPDYQRTKQQTLTRFVQEALESSNHGNNRKPNTSILKPDTSEYNDEDEEEGRSASRKRRKKVDESEEIAKNGEFTPSKSDGEYGTVSTSEDAIYEEKVEPAFDLMKTMLRASYSETKNVKSKAEEKNVELELSNNNKATKIDAMNGFGGNMKEDLEPERQLRGSVSNVRGDVEVKGKGGPRFKDLGGMKKVLEELKMEVIVPLYHPQLPRKLGVRPMAGILLHGPPGCGKTTLALAIANETGFPFYQISATEVVSGVSGASEENIRELFSKAYKTAPSIVFIDEIDAIAS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0959 328 MobiDBLite consensus disorder prediction 59 77 - -
Lele29g0959 328 Gene3D - 200 328 IPR027417 -
Lele29g0959 328 Coils Coil 151 171 - -
Lele29g0959 328 PANTHER AAA-FAMILY ATPASE 128 327 - -
Lele29g0959 328 Pfam Nucleolin binding domain 17 60 IPR031996 -
Lele29g0959 328 Pfam ATPase family associated with various cellular activities (AAA) 258 327 IPR003959 GO:0005524|GO:0016887
Lele29g0959 328 MobiDBLite consensus disorder prediction 87 111 - -
Lele29g0959 328 MobiDBLite consensus disorder prediction 59 126 - -
Lele29g0959 328 CDD AAA 253 327 - -
Lele29g0959 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 327 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0959 Lele-ChrLele29 7024308 7026072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0959 220 328 Calmodulin-binding Proteins AT3G56690 43.119 1.01e-22 97.4