Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0958 ATGGAGAAACGAATTGTGACACAATTAATGACTTCAATGGATCAATCAAGCAGGCTCTTACAACCAGCTGATAGTTCAGAAAGTTCTGATGCCCATCCTGGTTATATTCTTGTTATTGGAGCTACGAATAGGCCTGATGCTGTTGACCCTGCCCTGAGAAGGCCTGGGCGATTTGATCGTGAAATTTTTCTTGGTGTTCCTGATGAATGTGCTAGGGAGGAGATCTTGTCTGTGCTTACTCGCAATCTAAGTCTGGAGGGCTCATTTGATCTTAAAAAAATAGCCAGGTCTACACCAGGTTTTGTTGGAGCAGATTTGGCAGCTCTTGCTGACAAGGCAGGTAACCTAGCAATGAAAAGAATTATTCATGAGAGGAAATATGAATTATCCCAAGATCTTTTAGATGAGCATGATGAAGATTGGTGGAGGGAACCTTGGTTACCAGAAGAAATGGATAAGCTTGTCATCAAAATGTCAGATTTTGAGGAAGCAGTCAAATTGGTGCAACCTTCATCAAGAAGAGAAGGGTTTTCTTCCATTCCTAATGTAAAATGGGAAGATATTGGTGGGCTTGATCTTCTAAGACAAGAGTTTGAGCGCTATATTGTTAGACGCCTAAAATATCCAGACGATTATAAGGTAGTTTCGACTGAACTTATTGAATTGAATTGTGGCATTAGTCAAGGGTGTGGTAAAACACTGATAGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTTATTCATATCAAGGTGGATGCACTGACAACTAAACGTGGTAAAGAAGGTGGATGGGTTGTTGAGCGACTATTGAACCAGTTACTTATTGAATTAGATGGTGCAGACCAAAGGCAAGGTGTTTTTGTTATTGGTGCCACAAACAGGCCTGAGGTGATGGACCGTGCAGTCCTTCGGCCTGGTAGGTTAGGGAAACTTCTGTATGTTCCTCTGCCAAACTCAGATGAGCGAGGTCTGATCTTAAAGGCTCTTGCAAGGAAGAAGCCAGTGGATGACAGCGTGGATTTGTGTGCCATTGGAAGAATGGAAGCTTGTGAAAATCTCAGCGGTGCTGATCTTGCTGCATTGATGAACAAAGCAGCGCTGGCTGCTGCTGAAGAGAAGTTTACATCAACAGAGAGAACATCAGATACATTGACCATCAAGTTCAGCCATTTTGAGACTGCTCTCACTAAAATCTCTCCCTCAGTGTCAGATACGCAAAAACAATACTATCAACGATTGGCAGCGACTTTTAAGGCTGCATGA 1266 0.4273 MEKRIVTQLMTSMDQSSRLLQPADSSESSDAHPGYILVIGATNRPDAVDPALRRPGRFDREIFLGVPDECAREEILSVLTRNLSLEGSFDLKKIARSTPGFVGADLAALADKAGNLAMKRIIHERKYELSQDLLDEHDEDWWREPWLPEEMDKLVIKMSDFEEAVKLVQPSSRREGFSSIPNVKWEDIGGLDLLRQEFERYIVRRLKYPDDYKVVSTELIELNCGISQGCGKTLIAKAVANEAGANFIHIKVDALTTKRGKEGGWVVERLLNQLLIELDGADQRQGVFVIGATNRPEVMDRAVLRPGRLGKLLYVPLPNSDERGLILKALARKKPVDDSVDLCAIGRMEACENLSGADLAALMNKAALAAAEEKFTSTERTSDTLTIKFSHFETALTKISPSVSDTQKQYYQRLAATFKAA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0958 421 Gene3D - 178 255 IPR027417 -
Lele29g0958 421 Gene3D - 1 64 IPR027417 -
Lele29g0958 421 PANTHER AAA-FAMILY ATPASE 1 251 - -
Lele29g0958 421 Gene3D - 256 411 IPR027417 -
Lele29g0958 421 Pfam ATPase family associated with various cellular activities (AAA) 252 316 IPR003959 GO:0005524|GO:0016887
Lele29g0958 421 Pfam ATPase family associated with various cellular activities (AAA) 2 65 IPR003959 GO:0005524|GO:0016887
Lele29g0958 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 418 IPR027417 -
Lele29g0958 421 Gene3D - 318 397 - -
Lele29g0958 421 ProSitePatterns AAA-protein family signature. 287 305 IPR003960 GO:0005524|GO:0016887
Lele29g0958 421 Gene3D - 67 175 - -
Lele29g0958 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 174 IPR027417 -
Lele29g0958 421 CDD AAA 229 317 - -
Lele29g0958 421 FunFam Cell division control protein 48 homolog C 67 175 - -
Lele29g0958 421 ProSitePatterns AAA-protein family signature. 36 54 IPR003960 GO:0005524|GO:0016887
Lele29g0958 421 Pfam AAA+ lid domain 89 124 IPR041569 -
Lele29g0958 421 Pfam AAA+ lid domain 340 377 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0958 Lele-ChrLele29 7016085 7024286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0958 154 417 Calmodulin-binding Proteins AT3G56690 34.416 1.36e-40 152