Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0940 ATGGCGATCTCCACTACTCTTGAATATGTCACCGACGTCTTGCTCTATTTCTGGGTGTGCATTTTTATATGGTTGGCAAAAGCTCTTGCGACGAAGAGGAACAACAAAAGAAAACTCGTTGATGAAGTTCAGAAACCCCGTCTTATAAGTGGGAAGTCAGATGATAATGGGATTACTATTGATGACCTGAAGAAGCTGAATCGGAGAAATGTCTCTGCTTGGACTATGAAAAAGTTAATGAATATGATGCTTGATGAGCCGAAGATACTTGAGATTACAAGTGAAAATGAGGCAAAAGCTGCGGCAGAGAAAATATTTCAGAATGTCGCAAGGCCGGGTTCCAGCTTCATTTACCAGACGGATTTGATGCATTTTACGTTGGGAGATGAAGCTGAGAAAACCATGGATCTCGCATCATCTGAGTCTGAGATGATCAGCAAATCTGCATTGGAGAACTTTGTGGGTGCACTCTCAGACAAAACCTTAGCTAGCTCTCGAGTTCCTAGCCAGGTCCAGAAAATCAAAGGCATGTCTGGGAAACTTGAGCATGAGCTAGAGCTCGATGTGTCGGCGAGAAAGGCGTGGGATCTCTTCGGCACGATTCAGATTGCAGAACTTGTTGAGAAAGAGATGCCAAGTTTGTTTCAGAAGGTGGAGCTCGTTGAAGGTGATGGAGGAGTTGGAACTATACTCAAATTAACATTTCAACCTGGTACACCAGGGCCAACATTTTACAAAGAGAAGTTCACAAAGGTAGATAATCAGAATCGAATCAAAGAAACAGAGGTTGTAGAAGGAGGATATTTGGAATTAGGGTTTACCCGGTTCAGAGTTGGCTTTCAAGTGATAGAGAAAGGAGGAGAATCAAGCATAATCAAATCAACAGTTGAGTATGAACTGAAGGAAGATGCTGTAGCCAATGCCCCTATTGCTTCCCATGCAATTCAATCTCTAGCCAGCATTGTTCAAATGGCCAAAGCTCATCTCAACAAAAACAAGCTTCCCAATTAA 1011 0.4263 MAISTTLEYVTDVLLYFWVCIFIWLAKALATKRNNKRKLVDEVQKPRLISGKSDDNGITIDDLKKLNRRNVSAWTMKKLMNMMLDEPKILEITSENEAKAAAEKIFQNVARPGSSFIYQTDLMHFTLGDEAEKTMDLASSESEMISKSALENFVGALSDKTLASSRVPSQVQKIKGMSGKLEHELELDVSARKAWDLFGTIQIAELVEKEMPSLFQKVELVEGDGGVGTILKLTFQPGTPGPTFYKEKFTKVDNQNRIKETEVVEGGYLELGFTRFRVGFQVIEKGGESSIIKSTVEYELKEDAVANAPIASHAIQSLASIVQMAKAHLNKNKLPN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0940 336 CDD Bet_v1-like 179 329 - -
Lele29g0940 336 Gene3D - 167 334 IPR023393 -
Lele29g0940 336 SUPERFAMILY Bet v1-like 177 332 - -
Lele29g0940 336 FunFam Major pollen allergen Bet v 1-A 177 335 - -
Lele29g0940 336 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 38 154 IPR016688 -
Lele29g0940 336 SMART Bet_v_1_2 176 332 IPR000916 GO:0006952
Lele29g0940 336 Pfam Pathogenesis-related protein Bet v 1 family 177 331 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0940 Lele-ChrLele29 6703095 6710055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0940 54 154 Mechanosensitive Ion Channel Family AT1G78610 50.420 5.17e-25 104