Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0927 ATGATTTCCAATGACATCACTAAAGACATGGAGAAGTTACTTGGTGAAGCAACGAATGGCAAGTGGTCAAACGTACTTCAAATATACAAGGAAAAAAGGGAGTTTCGCGCGGCCAAGATAACGCCGACTGAAGACACGGTGTTACACATGGCTGTTTCTAGTGGGGAAAATGAGGTGGCGGAAAAGATGATTGACTTATTAGTTCGCGAAGAGAATGATCCCACTCAAAATAATGTGGTGGTTACAGTGGACGGAGACAACGAGCAGAGTTGGAACGTGAACGTCGTCCTTGGCGCTGAAAATGAAAAAAAGAACACTCCTCTGCACTTTGTAGCAAAAATGGGGAATGTTGAAATGTGCAAGAAGATCGGTGGCATAGACCGCTCCTTAATTGCTAAACCTAACATCGCCGGCGAGACACCCCTTTTCCTGGCGGCTCTGTATGGCAAGAAAGAAGCTTTTCTTTGGCTTCATTATCTGTATATGCAAAGCCCTGGAGTTTCTTCAACTGACTTTGCTCACTGTATAAGGGACAACGGCGATACCATTCTGTATTGTACAATTGAAGAAGGGCATATTGATGTGGCGATCGAAATAGTTCACCTTTATAAAGATCATATCAAAAAGATGATGGACCGCAACAAGGAAGGGTTGTCTCCACTTCATCTCCTTGCAGCACAGCGTTCAGCTTTCAAAAGTACTCAGCTCCTTGAAATACCACGCCTTGTTCATCCAATTTATCGGCATTTGAAAGTTGAGAAGAAGAATCAGGCCACGACGCTTGAAGAATTGCAAAAAAGTAAGCATAAAGTAAATAATGGTGGAGATTTGGGTTCTCTTCTTTATGGGAAAAGAAAATCAAGAAAACTTTTTGGTCAAGTACATCAAGTTTATATATTGGTGGTTGCTGCGATTCCCCTTGCGAATCCTGTTGGAACCATTTTTCTCAGGGATAAAGTAAATGGTGGAGATTTGGGTTCTCTTCTTTATGGGAAAAGAAAATCAAGAAAACTTTTTGGTCAAGTTTATCAACTTTATATATTGGTCATTTCCGCTATTCCCCTTGCGAATCCTGTTGCGAATCTTGTTGAAACCATTTCTCTCAGCAACAACACTGCTCCATCATCAACAATGACCATCTCCATTGCTTTTGACTATGTCATCGACGTCTTGCTCTGTTTCTCGGTGGGTATTTTTGTACGGTTGGCAAAAGCTCTTGCGGTTAAGGCTATGGCTTCTTGCTTCTATAAAAGCAAATACTTTGATAGGATTCAGAAGTCACTGTTTAATCAATTTCTGATTCAAACCCTGTCTGGGCCACCTCAGGAGTCAGACGAAGAGGAACTTCAGAAACTGCAGAAAAGCCACCGTCTTATAAGTGGGAACTCAGATGATGGGATTTCTATTGATCACCTAAAGAATATGAATCGGAAAAATGAGCCCATGCTTGAGATTACAAGTGAAGATGAGGCAAAAGCTGCGGCGGAGAAAATGTTTCAGAATCTTACCAGGCCGGTTTCCAGGTTTAGGCCTTTTGAGAGAGAGAGGAGAGAACTTGCTTTGACATTGAGTGATGCCAAAACCAGAGTGAAGAAACTTGAAGGAATGCCGATTTAG 1617 0.4193 MISNDITKDMEKLLGEATNGKWSNVLQIYKEKREFRAAKITPTEDTVLHMAVSSGENEVAEKMIDLLVREENDPTQNNVVVTVDGDNEQSWNVNVVLGAENEKKNTPLHFVAKMGNVEMCKKIGGIDRSLIAKPNIAGETPLFLAALYGKKEAFLWLHYLYMQSPGVSSTDFAHCIRDNGDTILYCTIEEGHIDVAIEIVHLYKDHIKKMMDRNKEGLSPLHLLAAQRSAFKSTQLLEIPRLVHPIYRHLKVEKKNQATTLEELQKSKHKVNNGGDLGSLLYGKRKSRKLFGQVHQVYILVVAAIPLANPVGTIFLRDKVNGGDLGSLLYGKRKSRKLFGQVYQLYILVISAIPLANPVANLVETISLSNNTAPSSTMTISIAFDYVIDVLLCFSVGIFVRLAKALAVKAMASCFYKSKYFDRIQKSLFNQFLIQTLSGPPQESDEEELQKLQKSHRLISGNSDDGISIDHLKNMNRKNEPMLEITSEDEAKAAAEKMFQNLTRPVSRFRPFERERRELALTLSDAKTRVKKLEGMPI 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0927 538 Gene3D - 5 123 IPR036770 -
Lele29g0927 538 Gene3D - 125 230 IPR036770 -
Lele29g0927 538 SUPERFAMILY Ankyrin repeat 17 229 IPR036770 -
Lele29g0927 538 PANTHER NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATED 18 259 - -
Lele29g0927 538 Coils Coil 247 267 - -
Lele29g0927 538 SMART ANK_2a 43 76 IPR002110 GO:0005515
Lele29g0927 538 SMART ANK_2a 103 132 IPR002110 GO:0005515
Lele29g0927 538 SMART ANK_2a 137 167 IPR002110 GO:0005515
Lele29g0927 538 SMART ANK_2a 179 209 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0927 Lele-ChrLele29 6587896 6594251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0927 390 536 Mechanosensitive Ion Channel Family AT2G17000 30.469 4.20e-20 92.4