Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0900 ATGTCAAGCAGCTCACAAGTTATAACTTGCAAAGGAGCAATATGTTGGGGAATAGGAGAGGGCGTGAAAGTGGAAGAGATTCAAGTAGACCCTCCTCAAGCTTCTGAAGTCAGAGTTAAGATGCTTTGTGCCAGTTTGTGCCACACAGACATCTTGAGATCTCGCGGATGGCCTTTTCCTGTTTTTCCTCAAGCACTAGGTCATGAAGGTGTAGGGGTTGTGGAGAGCATAGGGGAGAAAGTGACAAATCTAAAAGTAGGAGATATAGTAATTCCAACATTCATTGGAGAGTGTGGAGAATGTGAGAACTGCTTTTCAGAGGGATCAAACATATGCATGAGATATCCTTTAAGAGTGAGTGGGCTAATGCCTGATGACACATCAAGGATTTCAGTAAGAGGCCAAAAGGCATACCATGTGCTTAGCTGCTCAACATGGTGTGAGTATATGATTAGTGATGAAAATTACCTTATGAAAGTTGATCCAAATATTGAATTGGCTCACGCTAGCTTCATCTCTTGTGGATTCTCTACTGGTTTTGGTGCTTCTTGGAAGGCTGCAAAAGTTCAGAGTGGATCATCTGTGTCTGTCTTTGGCCTGGGAGCTGTTGGATTAGGGGCAATAAGTGGAGCCCAGATGATGGGAGCAACTAAGATAATAGGGATTGACACCAATCAGAAGAAGAAAGAAAAGGGAAAAGCTTTTGGAATGACAGATTTTATAAATCCGAAGGATCATTCTGATAAGCCTTCTTCTCAATTGGTGAAAGAGCTTACTGGTGGATTGGGTGTGGATTATGCCATTGAGTGCACTGGTGTTTCCGCTTTACTTACACAAGCACTAGAATCCACAAAATTGGGAAGAGGAAAGGCAATAGTAATCGGTGCAGGAAACGAGGAATATTTTCAGGTCAACTGGTTAGGACTTCTTCTTGGAAGAACTTTAAAAGGTTCCATTTTTGGAGACATAAAACCCAAATCTGACCTTCCTCTTTTAGCTGCCAAATGCCTAAACAAGGATATTCCTCTTGATGAACTTCAAACCCATGAAATTCATTTAACAGAGATCAGCAAAGCATTTGAGCTATCAAAACAGCCAGACTGTGTCAAACTTATCATCAAGATATGA 1128 0.4149 MSSSSQVITCKGAICWGIGEGVKVEEIQVDPPQASEVRVKMLCASLCHTDILRSRGWPFPVFPQALGHEGVGVVESIGEKVTNLKVGDIVIPTFIGECGECENCFSEGSNICMRYPLRVSGLMPDDTSRISVRGQKAYHVLSCSTWCEYMISDENYLMKVDPNIELAHASFISCGFSTGFGASWKAAKVQSGSSVSVFGLGAVGLGAISGAQMMGATKIIGIDTNQKKKEKGKAFGMTDFINPKDHSDKPSSQLVKELTGGLGVDYAIECTGVSALLTQALESTKLGRGKAIVIGAGNEEYFQVNWLGLLLGRTLKGSIFGDIKPKSDLPLLAAKCLNKDIPLDELQTHEIHLTEISKAFELSKQPDCVKLIIKI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0900 375 Gene3D - 179 318 - -
Lele29g0900 375 SUPERFAMILY GroES-like 4 190 IPR011032 -
Lele29g0900 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 337 IPR036291 -
Lele29g0900 375 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Lele29g0900 375 Pfam Zinc-binding dehydrogenase 202 322 IPR013149 -
Lele29g0900 375 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Lele29g0900 375 Gene3D - 14 370 - -
Lele29g0900 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Lele29g0900 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 318 - -
Lele29g0900 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Lele29g0900 375 CDD liver_alcohol_DH_like 8 374 - -
Lele29g0900 375 SMART PKS_ER_names_mod 17 373 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0900 Lele-ChrLele29 6186211 6189099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0900 36 335 Monolignol Biosynthesis Gene Families AT4G37990 25.574 3.57e-15 74.3