LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele29g0867	ATGATGAGCAAGTATTTGCTTTTAGGCTTTTACATCACAGTATCCTGCATCGCTTTTTTTATATCCAAGATCATTATCTCAGTCCTCCTCTACAAAAGATGGAAAAGAAAGCACATTATTCACGAAGAAGGCTGTGCAGGTGGGAAGATGGTGATATTCAGGTCTTCGGTTCTGCAAACCCTCGAATTTAACACGATCTTGAAGAAGAAGACGATGATGAACCTGAGTAATATGGAGGTAATTGGATGTGGTGGTTATGGGACGGTTTATAAACTGAAAATAGACGAGTCAAAAGCTTTTGCAGTGAAAAGACTGAACAGAGGAACTGCAGATAAAGGATTTGATAGAGAGCTGGAAGCAATGGCAGACATAAAACACCGCAATATTGTAACTCTTCATGGATATTATACAGCTCCTCATTACAACCTCCTCATTTATGAGTTGATGCCTAACGGAAGTTTGGATAATTTCCTCTACAGAAGACCAGAGCAGAAGAAAACTTTAAATTGGTCATCCAGATACAGAATAGCTGTAGGTTCTGCTAGAGGAATATCTTATCTTCACCATGATTGTATCCCTCACATAATCCACAGAGATATCAAGTCAAGCAATATATTGCTCGACGAAAACATGGAGGCTCGAGTTTCTGATTTCGGATTAGCCACGTTGATGGAACCTAACAAAACCCATGTTTCCACAATTGTGGCTGGAACTTTTGGATACTTAGCTCCTGAATATTTCGATACGGGAAGAGCAACATTCAAGGGGGATGTTTACAGTTATGGAGTTGTACTACTGGAGCTTTTAACTGGGAGAAAACCCAGTGATGAAACATTTATGGAAGAAGGAACGAAGCTGGTCACATGGGTGAAGGCTATTGTTCAAGAAAAGAAGGAGGAACTAGTTCTCGATGATAGGCTAGGGACCTGTCCAATGCAAGAAGTTAACAATGTGTTCAATATTGCCATGATGTGTCTTGAATCTGATCCCTTGAAGAGACCGACAATGGAAGAAGTTGTCAACTTGCTTGAGCAAACGAAGCCAGACAAACTCGCTACAGCTTCCTGA	1068	0.4064	MMSKYLLLGFYITVSCIAFFISKIIISVLLYKRWKRKHIIHEEGCAGGKMVIFRSSVLQTLEFNTILKKKTMMNLSNMEVIGCGGYGTVYKLKIDESKAFAVKRLNRGTADKGFDRELEAMADIKHRNIVTLHGYYTAPHYNLLIYELMPNGSLDNFLYRRPEQKKTLNWSSRYRIAVGSARGISYLHHDCIPHIIHRDIKSSNILLDENMEARVSDFGLATLMEPNKTHVSTIVAGTFGYLAPEYFDTGRATFKGDVYSYGVVLLELLTGRKPSDETFMEEGTKLVTWVKAIVQEKKEELVLDDRLGTCPMQEVNNVFNIAMMCLESDPLKRPTMEEVVNLLEQTKPDKLATAS	355

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele29g0867	355	ProSitePatterns	Protein kinases ATP-binding region signature.	81	103	IPR017441	GO:0005524
	Lele29g0867	355	PANTHER	LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1	14	347	-	-
	Lele29g0867	355	Gene3D	Transferase(Phosphotransferase) domain 1	149	353	-	-
	Lele29g0867	355	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	149	354	-	-
	Lele29g0867	355	ProSiteProfiles	Protein kinase domain profile.	75	347	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele29g0867	355	SUPERFAMILY	Protein kinase-like (PK-like)	62	345	IPR011009	-
	Lele29g0867	355	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	16	-	-
	Lele29g0867	355	SMART	serkin_6	75	343	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele29g0867	355	FunFam	Receptor-like serine/threonine-protein kinase	44	148	-	-
	Lele29g0867	355	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	195	207	IPR008271	GO:0004672\|GO:0006468
	Lele29g0867	355	Pfam	Protein kinase domain	77	341	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele29g0867	355	Gene3D	Phosphorylase Kinase; domain 1	51	148	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele29g0867	Lele-ChrLele29	5892998	5895763	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele29g0867	4	345	Receptor kinase-like Gene Family	AT2G35620	45.690	4.23e-98	300

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XIIIa	Lele29g0867		Pkinase	1.5e-49	CL0016