Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0859 ATGTTCTGTTTTCTCCGCAAAACAATCCCTTTTCGAAGGGGTACTATTTTCGACACCGTTTCTCCAGAATTGCTTTGTCTTCAACCCCAATGGTTATGTGTCAGCTACTGTAATTCAGTCGCATCAAATGGGAGTTCTTTCACTGTCTCATATCTCATCGACACATGTGGGTTTTCCCCCCAAGAAGCTGCTTCAGCTTCTAAGCGAGTCAGCTTCGAATCGCGAGATAAGCCAGATTTGGTTATCAATTTCCTCAAGAGTCAAGGACTCACTCAGCCGCAGATTCGTCGTTGCGTTAGAGTGGTCCCAACTATTCTTCGATCTGATCCTAAGAAAGCCTTCCTGCCTAAGATTGAGTTCTTCAAATCCAATGGCGTTTCGGTCTCAGACATCCCTAAGCTCATATGCAGTTGCCCTAACATCATGGAGAGAAGCTTAAGTAAGCAAATCATTCCTTCCTTTGATTTCTTTAGAGATCTGTTTCAATCTGACGTCAAATTCATTCAAGTTATCACAACTTTCTCGGGTATTCTTCTTGATTTAAATAGCCGTCCCATGCCTAATATAAAGTTATTAAAGGAAACAGGAGTTCCTGAAGCAAATATTAGAAGATTGTTGCAATATTTTCCTTCAGCAATAACTAAAATTCCTGTCCGATTTGAGGAGATTGTGAAGGAAGTGAAGGAACTGGGGGTTAATCCTTCGATGGTAAATTTTGTTTTAGCCGTTGCTGTGTTAGCATCAGTAAGCAAATCCACATGGGAAAAAAAGGCTAATGTTTATAAGAAATGGGGTTTGTCTGAGGATGACATTATTGCAGCATTTAGAAAGCGTCCATTAATCATGAAGTCATCAGAAGATAAGATTGATGCAGTGATAGGTTTTTTGGTGAACAAACTGGGATGTGAATCTTCCATTATTGCTAAATATCCAGGGGTTGTCGCATTCAGTATGAATCGGAGGTTTTTGCCAAGAGGTGCTGTGATTGAGGTTTTGTTGTCAAAGGGTCTGTTGCAAAAGGAAAGTGTGCCACTTTCATTTATGTGCCCTGATAACATCTTTCTGAAAAGGTTTATCATGTCTCACCAGAAGGAAGCTTCTGAACTATTGAAGCTGTATCAGAGTAAATTGGAGCTTGCAAGGTGA 1146 0.404 MFCFLRKTIPFRRGTIFDTVSPELLCLQPQWLCVSYCNSVASNGSSFTVSYLIDTCGFSPQEAASASKRVSFESRDKPDLVINFLKSQGLTQPQIRRCVRVVPTILRSDPKKAFLPKIEFFKSNGVSVSDIPKLICSCPNIMERSLSKQIIPSFDFFRDLFQSDVKFIQVITTFSGILLDLNSRPMPNIKLLKETGVPEANIRRLLQYFPSAITKIPVRFEEIVKEVKELGVNPSMVNFVLAVAVLASVSKSTWEKKANVYKKWGLSEDDIIAAFRKRPLIMKSSEDKIDAVIGFLVNKLGCESSIIAKYPGVVAFSMNRRFLPRGAVIEVLLSKGLLQKESVPLSFMCPDNIFLKRFIMSHQKEASELLKLYQSKLELAR 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0859 381 FunFam Mitochondrial transcription termination factor-like 146 366 - -
Lele29g0859 381 Pfam mTERF 82 357 IPR003690 GO:0003690|GO:0006355
Lele29g0859 381 Gene3D Transcription termination factor 3, mitochondrial 182 372 IPR038538 -
Lele29g0859 381 Gene3D Transcription termination factor 3, mitochondrial 58 181 IPR038538 -
Lele29g0859 381 PANTHER CGI-12 PROTEIN-RELATED 44 363 IPR003690 GO:0003690|GO:0006355
Lele29g0859 381 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Lele29g0859 381 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
Lele29g0859 381 SMART mt_12 22 59 IPR003690 GO:0003690|GO:0006355
Lele29g0859 381 SMART mt_12 203 233 IPR003690 GO:0003690|GO:0006355
Lele29g0859 381 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Lele29g0859 381 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0859 Lele-ChrLele29 5835418 5836563 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele29g0859 mTERF 6.3e-33 No_clan