Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0858 ATGCCCTGGTTTATACTGATACGTCTTCGCGCGAGGGTTTTGCTTGGCAAGTTTTGTGAATCCATGTTTTGCTTTCTCAGAAGAATCGTCCCTTCTCGGAGGCATATCTCTCCAACATTTCAACAATTACTTCGTGTTCAAAACAAATGGCTACCTGCCACTGCCAGGTATTGTAATTCAATTGCATCCAATGGGCATTCTTTCACAGTCTCATATCTCATTGACACCTGTGGCTTCTCACCAGAAGAAGCTGCTTCAGCTTCCAAGTATGTCAGCTTCAAATCGCGAGAAAAACCAGATTTGGTTATCAATTTCTTGAAGAATCTTGGATTCTCAAAATCCCAGATTCTTCGTTTCACACGAGAAGCCCCGCAGTGTCTTCGATATGACCCTGAAAAAACCTTGCTCCCCAAGATCGAGCTTTTCATATCCAGAGGCGTTTTGAGCTCAGATATCCCTAAGCTCTTGTGTACTTGTCCTAACATTATGAGAAGAAGCTTGAATAAGCAGCTCCTTCCTTCGTTTGATTTCTTTCGGGATTTGTTTCAATCTGATGACAAGCTCATCAAATCTGTTACATATTTCCCGGGCATTCTTCTTGATACTAACACCCGTGTCGTTCCTAATATGAATCTATTAAGAGAAGTCGGAGTTCCTGAATCAAATGTAATTAAATTGTTGCAACTGTACCCCAGGACATTTACTACAAGTACTGGTCGATTCAAGATGATTGTGAAGGAGCTTCAGGAAATGAAGTTTGATCCTTTAAGGTATCTATTTGTTATGGCTGTTTATGCGTTGTCGTCACTAAGCAAATCTACGTGGTCAAAAAAGGCTAACGTGTATAAGAAGTGGGGCTGGTCTGAGGAGGACATTATTGTTGCTTTTAGAACGTCTCCATTTTGTATGAAGGTATCTGAGGATAAAATTGATGCAACAATGAAGATTCTCGTTGATAAATTGGGCTGTCCACCTTCCACTATTCCCAGATATGCAGTAGTTCTGACATTAAGTGCAAATAAGCGAATTATTCCTCGGGCATCTGTCTTTCAAGTTTTGTTATCAAAGGGTCTGGTGAAAAAGAAAAGCTTGCTCGCAATATTTGTCTGCACTGAAAGGGAGTTTTTGAAAAGATTTATCCCTAGTCATGGGGAAGAAGGCATTGAACTCCTGAAGCTGTATCGTGCTAAACTAGATCTTGCAAGAATGCAAAGTAAATGA 1221 0.4054 MPWFILIRLRARVLLGKFCESMFCFLRRIVPSRRHISPTFQQLLRVQNKWLPATARYCNSIASNGHSFTVSYLIDTCGFSPEEAASASKYVSFKSREKPDLVINFLKNLGFSKSQILRFTREAPQCLRYDPEKTLLPKIELFISRGVLSSDIPKLLCTCPNIMRRSLNKQLLPSFDFFRDLFQSDDKLIKSVTYFPGILLDTNTRVVPNMNLLREVGVPESNVIKLLQLYPRTFTTSTGRFKMIVKELQEMKFDPLRYLFVMAVYALSSLSKSTWSKKANVYKKWGWSEEDIIVAFRTSPFCMKVSEDKIDATMKILVDKLGCPPSTIPRYAVVLTLSANKRIIPRASVFQVLLSKGLVKKKSLLAIFVCTEREFLKRFIPSHGEEGIELLKLYRAKLDLARMQSK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0858 406 SMART mt_12 117 148 IPR003690 GO:0003690|GO:0006355
Lele29g0858 406 SMART mt_12 189 219 IPR003690 GO:0003690|GO:0006355
Lele29g0858 406 SMART mt_12 153 184 IPR003690 GO:0003690|GO:0006355
Lele29g0858 406 SMART mt_12 325 359 IPR003690 GO:0003690|GO:0006355
Lele29g0858 406 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Lele29g0858 406 SMART mt_12 224 254 IPR003690 GO:0003690|GO:0006355
Lele29g0858 406 Pfam mTERF 103 329 IPR003690 GO:0003690|GO:0006355
Lele29g0858 406 Pfam mTERF 230 376 IPR003690 GO:0003690|GO:0006355
Lele29g0858 406 Gene3D Transcription termination factor 3, mitochondrial 176 387 IPR038538 -
Lele29g0858 406 PANTHER CGI-12 PROTEIN-RELATED 64 383 IPR003690 GO:0003690|GO:0006355
Lele29g0858 406 FunFam Mitochondrial transcription termination factor-like 167 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0858 Lele-ChrLele29 5831629 5832849 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele29g0858 mTERF 5e-28 No_clan