Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0857 ATGGACGCATGTGGCTTCTCACCCGAAGAAGCTACTTCAGCTTCCAAGCATGTCAGCTTCAAATCGCGAGAAAAACCAGATTTGGTTATCAATTTCTTGAAGAATCTCGGATTCTCAAAATCCCAGATTCTTCGTTTCACACGAGAAGCTCCGCAGTGTCTTCGATATGACCCTGAGAAAACCTTACTCCCCAAGATCGAGCTTTTCATATCCAGAGGCGTTTTGAGCTCAGACATCCCTAAGCTCTTATGTATCTGTCCTAACATTATGAGAAGAAGCTTGAATAAGCAACTCCTTCCTTCGTTTGATTTCTTTCGGGATTTGTTTCAATCTGATGACAAGTTCATTAAATCTCTTACATATTTCCCGGGCATTGTTCTTGATACTAACACCCGTGTCGTGCCTAATATGAATCTATTAAGAGAAGTCGGAGTTCCTGAATCAAATGTCATGAGATTGTTGCAACTGTTTCCCAGGACATTGACCGTAAGTACTGGTGGATTCAAGATGATTGTGAAAAATCTTCTGGGAATGGGTTTTGATCCTTTAAAGCATCTATTTGTTATCGCAGTTTATGCAATGTCATCACTAAGCAAATCTACATGGTCAAAAAAGGCCGATGTGTATAAGAAATGGGGCTGGTCTGACGAGGACATTATTGCTGCTTTTAAAAGGTGTCCATTTTGTATGAAGTTATCTGAGGATAAGATTGATGCAATAATGGAGATTCTCGTTGATAAATTGGGCTGTTCCCCTTCCACTATTCCCAGATATGCAGTTGTTCTGACATTCAGTACAAATAAGCGAATTATTCCCCGGGCATCTGTCTTTCAAGTTTTGCTCTCAAAGGGTCTGGTGAAAAAGAAAAGCTTGCTCCCAATATTTGTCTACACTGAAAGGGTGTTTTTGAAAAGATTTATCCTGAGTCATGGGGAAGAAGGTATTGAACTCCTGAAGCTGTATCATGCTAAACTAGATCTTGCAAGAATGCAAGGTGAATGA 1002 0.4022 MDACGFSPEEATSASKHVSFKSREKPDLVINFLKNLGFSKSQILRFTREAPQCLRYDPEKTLLPKIELFISRGVLSSDIPKLLCICPNIMRRSLNKQLLPSFDFFRDLFQSDDKFIKSLTYFPGIVLDTNTRVVPNMNLLREVGVPESNVMRLLQLFPRTLTVSTGGFKMIVKNLLGMGFDPLKHLFVIAVYAMSSLSKSTWSKKADVYKKWGWSDEDIIAAFKRCPFCMKLSEDKIDAIMEILVDKLGCSPSTIPRYAVVLTFSTNKRIIPRASVFQVLLSKGLVKKKSLLPIFVYTERVFLKRFILSHGEEGIELLKLYHAKLDLARMQGE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0857 333 Pfam mTERF 196 302 IPR003690 GO:0003690|GO:0006355
Lele29g0857 333 Pfam mTERF 30 257 IPR003690 GO:0003690|GO:0006355
Lele29g0857 333 FunFam Mitochondrial transcription termination factor-like 94 313 - -
Lele29g0857 333 Gene3D Transcription termination factor 3, mitochondrial 117 313 IPR038538 -
Lele29g0857 333 PANTHER CGI-12 PROTEIN-RELATED 2 310 IPR003690 GO:0003690|GO:0006355
Lele29g0857 333 SMART mt_12 220 251 IPR003690 GO:0003690|GO:0006355
Lele29g0857 333 SMART mt_12 252 286 IPR003690 GO:0003690|GO:0006355
Lele29g0857 333 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Lele29g0857 333 SMART mt_12 44 75 IPR003690 GO:0003690|GO:0006355
Lele29g0857 333 SMART mt_12 116 146 IPR003690 GO:0003690|GO:0006355
Lele29g0857 333 SMART mt_12 80 111 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0857 Lele-ChrLele29 5826896 5827897 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele29g0857 mTERF 5.4e-29 No_clan