Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0856 ATGCTTTGGTGTCTCAGAAAAATCATCCCTTTTCGGAGGCATATCATTGACGCAATCTCTAATTCAACATCTCAACAATGTCATCGCGTTCAAAGCCAATGGCTACCTGCCACTGCCAGGTACTGTAATTCAACTGCATTCGATGGGCATTCTTTCACAGTCTCGTATCTCATTGACACATGTGGCTTCTCTCTCGAAGAAGCTGCTTCAGCTTCCAAGCATATCCGCTTGAAAACGCGAGAAAAACCGGATTTGGTTATCAATTTCTTGAAGAATCTCGGATTATCAAAATTCCAGATTCTTCGTTTCACAAGAGAAGTCCCACAGTGTCTTCGATCTGACCCTGAGAAAACCTTACTCCCCAAGATCGAGTTTTTCATATCCAGAGGCGTTTCGAGCTCAGACATCCCTAAGCTCTTATGTAGTTGTCCTACCATGATGAAGAGAAGCTTAAATAAGCATATCATTCCTTCCTATGATTTCTTTCGAGATTTGTTTCAATCCGATGACAAGCTCATTAAAGCTCTTAAATATTGCTCGGGCATTCTTATTGATGTTAACACCCGTGTCGTGCCTAATATGAATCTATTAAGAGAAATCGGAGTTCCTGAATCAAATGTCATTAAATTGTTGCAACATCATCCTGGGACATTGACTTTTAGTACTGGTCGATTCAAGAGGATTGTGAATGCGATTCAGGAAATGGGGTTTGATCCTTTAAAGTATCACTTTGTTATGGCCGTTTATGCATTGTCATCACTAAGCAAATCTACATGGTCAAAAAAGGCCAATGTGTATAAGAAGTGGGGCTGGTCTGACAAGGACATTATTGATGCTTTTAGAACTTTTCCATTTTGTATGAAGGTATCTGAGAATAAAATTGATGCAACAATGGAGATTCTCGTTAGTAAATTGGGCTGTCCACCTTCCACTATTCTTAGATATGCAGTAGTTCTGGGACTAAGTGCAAATAAACGAATTATTCCCCGGGCATCTGTCTTTCAAGTTTTGTTGTCAAAGGGTCTGGTGAAAAAGGAAAGCTTGCTCCCAATATTTATATGCACTGAAAGGGTGTTTTTGAAAAGGTTTATCCTGAGTCATGATGGGGAAGAAGGTAGTGAACTCCTGAAGCTGTATGAGGCTAAACTAGATCTTGCAAGGTGA 1164 0.4012 MLWCLRKIIPFRRHIIDAISNSTSQQCHRVQSQWLPATARYCNSTAFDGHSFTVSYLIDTCGFSLEEAASASKHIRLKTREKPDLVINFLKNLGLSKFQILRFTREVPQCLRSDPEKTLLPKIEFFISRGVSSSDIPKLLCSCPTMMKRSLNKHIIPSYDFFRDLFQSDDKLIKALKYCSGILIDVNTRVVPNMNLLREIGVPESNVIKLLQHHPGTLTFSTGRFKRIVNAIQEMGFDPLKYHFVMAVYALSSLSKSTWSKKANVYKKWGWSDKDIIDAFRTFPFCMKVSENKIDATMEILVSKLGCPPSTILRYAVVLGLSANKRIIPRASVFQVLLSKGLVKKESLLPIFICTERVFLKRFILSHDGEEGSELLKLYEAKLDLAR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0856 387 PANTHER CGI-12 PROTEIN-RELATED 49 367 IPR003690 GO:0003690|GO:0006355
Lele29g0856 387 FunFam Mitochondrial transcription termination factor-like 151 370 - -
Lele29g0856 387 Pfam mTERF 87 238 IPR003690 GO:0003690|GO:0006355
Lele29g0856 387 Pfam mTERF 253 359 IPR003690 GO:0003690|GO:0006355
Lele29g0856 387 Gene3D Transcription termination factor 3, mitochondrial 49 185 IPR038538 -
Lele29g0856 387 Gene3D Transcription termination factor 3, mitochondrial 186 368 IPR038538 -
Lele29g0856 387 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Lele29g0856 387 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Lele29g0856 387 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Lele29g0856 387 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Lele29g0856 387 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Lele29g0856 387 SMART mt_12 173 203 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0856 Lele-ChrLele29 5822392 5823555 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele29g0856 mTERF 4.3e-21 No_clan