Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0844 ATGGAGTTATTAGCGATTTCAAGCTCTAAACTGTTGTGTGTATTCGCATTGGGATTCTTCGCTCTGAATGTTTCCACTGATTATGGATCCAACGCTCAGAAGATACCAGATGATGAAGTGAGGGCTCTACAAGCAATATCATCAAAGATGAAGGACTTGAATTGGAAGGTAAGCCCAAATTCTTGTATAGATGGAGGCTTCATAAATAAGAGCATTGTAGGAGACGACATCATTAGAAATGTGACATGCAATTGCACCTTCTCCAATGGAAAAGTTTGCCAGGTTACACATATTGATTTGACTCGCAACTATCTGAATGGCTCAATCCCAAAGAGCTTTGCTAAACTTCCTCTTGTCGCAATAGTTTTGGAAAATAATCATTTAGAAGGAACTCTTCCTTCTAGTCTTGGAAAATTGAAGCAGTTAAGCAGATTGCTTCTTTCTGCAAATGATTTCTCAGACTTTGAAATTCCTTCAGATGGGCTTTCTGCTGGAGCCATTGCTGGAAGTGTGGCTGGATCATGTGTGTTCCTCACACTGATATTGTTTGTCCTTTGGAAGATGGTTTTCTTAGGTGGTAAAGATCCACAAGACAAGGGTGCACTATCAGATGGTACTGTCATAGCTGTGAAGCAACTCTCCTCGAAATCAAAGCAAGGAAATCGCGAATTTGTCAATGAAATAGGAATGATCTCTGCTTTGCAACACCCTAATCTTGTCAAGCTTTATGGCTGCTGCATTGAAGGAAACCAGTTGTTGTTGGTATATGAGTACTTGGAGAATAACAGTCTTGCTCGCGCTCTTTTTGGTAAGAGTTTAGATGATTTATATGAATACCCTTTGACCCCTAATTCCCCTTGTCATGGCTATTTCCCAGAGTTCATACACTTTCATTTTTCTTTATCACTCTCTCTTTTATTGTGCTGCCATTCAACTGCATGGGATCTCCAAGGTTTCTCAATAAATGCGTTGTTGATGACTTTTGAGTTATATCTTATTGATATTCTTAGGTCTCCAAGAACAGAAATTACACTTGGATTGGCCTACAAGAATGAAAATCTGTGTAGGGATAGCAAGAGGATTAGCTTATCTTCACGAGGAATCGAGGCCTATGTTCTTGAAGAGCAAGGAAACCTTCTTGAGTTGGTGGATCCAAGTCTTGGTTCAAGCTATTCCTCAGAGGAAGCCATGAGAATGCTGAAGTTGGCACTCTTATGTACTAATCCATCTCCAATTCTCAGACCATCCATGTCCTCTGTTGTTAGCATGCTTGAAGGAAAATCGCCGATCCAAGCGCCGATAATCAAGCGCCGGGAGGGTGACCAAGATGTGAGATTCAAAGCCTTTGAGATGCTATCACAAGACAGCCAAAGCCAAACCTTTGCTTCTTCTTCTACATTCTCACAAGAAAGCTTGGAGCAGAGACTTCAATCAATGGCCCCATGGGTTGATTCCTCTGATTATCTTCCAACTAAAGATTGCTCTTCATAA 1491 0.4091 MELLAISSSKLLCVFALGFFALNVSTDYGSNAQKIPDDEVRALQAISSKMKDLNWKVSPNSCIDGGFINKSIVGDDIIRNVTCNCTFSNGKVCQVTHIDLTRNYLNGSIPKSFAKLPLVAIVLENNHLEGTLPSSLGKLKQLSRLLLSANDFSDFEIPSDGLSAGAIAGSVAGSCVFLTLILFVLWKMVFLGGKDPQDKGALSDGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYLENNSLARALFGKSLDDLYEYPLTPNSPCHGYFPEFIHFHFSLSLSLLLCCHSTAWDLQGFSINALLMTFELYLIDILRSPRTEITLGLAYKNENLCRDSKRISLSSRGIEAYVLEEQGNLLELVDPSLGSSYSSEEAMRMLKLALLCTNPSPILRPSMSSVVSMLEGKSPIQAPIIKRREGDQDVRFKAFEMLSQDSQSQTFASSSTFSQESLEQRLQSMAPWVDSSDYLPTKDCSS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0844 496 Gene3D Transferase(Phosphotransferase) domain 1 350 445 - -
Lele29g0844 496 SUPERFAMILY L domain-like 94 155 - -
Lele29g0844 496 ProSiteProfiles Protein kinase domain profile. 162 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0844 496 FunFam Os04g0616200 protein 198 259 - -
Lele29g0844 496 Pfam Protein tyrosine and serine/threonine kinase 205 270 IPR001245 GO:0004672|GO:0006468
Lele29g0844 496 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 370 462 - -
Lele29g0844 496 SUPERFAMILY Protein kinase-like (PK-like) 201 426 IPR011009 -
Lele29g0844 496 SMART tyrkin_6 166 424 IPR020635 GO:0004713|GO:0006468
Lele29g0844 496 Gene3D Phosphorylase Kinase; domain 1 196 260 - -
Lele29g0844 496 Gene3D Ribonuclease Inhibitor 39 164 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0844 Lele-ChrLele29 5688211 5697063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0844 162 495 Receptor kinase-like Gene Family AT1G53440 44.146 1.00e-80 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele29g0844 PK_Tyr_Ser-Thr 7.3e-12 CL0016