Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0839 ATGGGAGGTGGATTTAGGGCGCTTCATCTGGTTAAACCGTTTCTGTCATTTGTGCCTGAAGTTGAGAGTCCCTACAAGAAAATCCCATTTAGGGAGAAGATGATATACACAGTGATATCTCTCTCCATCTTCCTGGTTTGCAGTCAGCTACCTCTCTATGGAATACACTCAACTACTGGTTCAGATCCCTTATACTGGATGCGAGCCATTACTGCTTCGTCTCGAGGAACGGTTATGGAGCTCGGCATCGGTCCCATTGTAACTTCTGGTATGATAACGCAACTCTTGGTAGGTTCAAAGATCATCGAGGTGAACAATAATGTTCGTGAGGATCGTAATCTCTTGAGTGGAGCACAGAAGTTGCTTGGAATCTTGATTGCAGTTGGACAGGCAACTACCTATGTTTCTTCAGGGATGTATGGTAGTGTGAACCAACTTGGGGTAGGAAATGCTATTCTGATCGTTACTCAGCTTTGCTTGGCTAGCATCATGGTCATTGAGAACATTATATGGAAGGCATTTAGTCCTACCACCATTAACAATGGACGAGGGGTTGAATTCGAGGGAGCTTTCATTGCTTTAGTTCATTTGTTGCTTACTCGAACCGACAAGGTTCGGGCTCTTCGGGAGGCGTTTTATCGACAAAATCTACCGAATGTCACAAATCTGCTTTCCACAGTGTTGATGTTCTTGATTGTGATATACTTCCAAGGTTTCCGTGTGATTTTGCCAATAAGATCAAAGAATTCTCGTGGCTACAAAGGTTCATATCCAATCAAATTGTTCTATACCTCTAACATGCCCATCATTCTTGTATCTTCCCTCGTTTTCAACTCCTACATGATCTCCCAGGTATTATATCGATTGTTTAAAGGAAACTTCATTGTAAATTTGATTGGAAAATGGAAAGAAACTGAATATGGTGGTAGTCACTCTATTCCTGTTGGTGGCCTTATGTACTACATCACTGCCCCATCCAGCTTGGTTGATATTGCCGTGGATCCTATCCGTGCGATGTTTTATGTTGTATTTATGTTGTCAGCGTGTGCCATATTCTCCAAATTATGGATCATAGTCTCTGGATCTTCTGCTAGAGATGTTGCCAAGCAACTTAAGGAGCAACAAATGGTGATGCCTGGGCATCGTGAGTCAAACTTAGAGAAGGAGTTGAATCGATATATCCCTACGGCGGCGGCATTTGGCGGCGTGTGCATCGGAGCTTTGACGGTCTTGGCAGATTTAATGGGAGCGATTGGGTCAGGGACTGGTATATTACTTGCAGTGACCACAATCTATCAATATTACGAGACATTTGAGAAGGAGAGAGCAACTCAGCTTGGATTCTTTGATTTTTAA 1356 0.4299 MGGGFRALHLVKPFLSFVPEVESPYKKIPFREKMIYTVISLSIFLVCSQLPLYGIHSTTGSDPLYWMRAITASSRGTVMELGIGPIVTSGMITQLLVGSKIIEVNNNVREDRNLLSGAQKLLGILIAVGQATTYVSSGMYGSVNQLGVGNAILIVTQLCLASIMVIENIIWKAFSPTTINNGRGVEFEGAFIALVHLLLTRTDKVRALREAFYRQNLPNVTNLLSTVLMFLIVIYFQGFRVILPIRSKNSRGYKGSYPIKLFYTSNMPIILVSSLVFNSYMISQVLYRLFKGNFIVNLIGKWKETEYGGSHSIPVGGLMYYITAPSSLVDIAVDPIRAMFYVVFMLSACAIFSKLWIIVSGSSARDVAKQLKEQQMVMPGHRESNLEKELNRYIPTAAAFGGVCIGALTVLADLMGAIGSGTGILLAVTTIYQYYETFEKERATQLGFFDF 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0839 451 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 31 442 IPR002208 GO:0015031|GO:0016020
Lele29g0839 451 Pfam SecY 77 435 IPR002208 GO:0015031|GO:0016020
Lele29g0839 451 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 18 445 IPR002208 GO:0015031|GO:0016020
Lele29g0839 451 SUPERFAMILY Preprotein translocase SecY subunit 10 441 IPR023201 -
Lele29g0839 451 ProSitePatterns Protein secY signature 1. 77 96 IPR030659 -
Lele29g0839 451 PIRSF SecY_Sec61alpha 8 446 IPR002208 GO:0015031|GO:0016020
Lele29g0839 451 Gene3D SecY subunit domain 9 164 IPR023201 -
Lele29g0839 451 Gene3D SecY subunit domain 165 448 IPR023201 -
Lele29g0839 451 Pfam Plug domain of Sec61p 43 76 IPR019561 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0839 Lele-ChrLele29 5617267 5620001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0839 1 449 Miscellaneous Gene Families AT1G78720 75.316 0.0 728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0839 29 5617267 5620001 Lele31g0691 31 14785377 14788035 hybridization