Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0832 ATGGCAGGTGTTGGACCTCTTTCACAGGATTGGGAGCCCGTGGTGATCCGGAAGAAGGCACCAACAGCGGCGGCGAAGAAAGATGAGAAAGCTGTCAACGCCGCTCGTCGCTCCGGCGCCGATATTGAAACCGTAAAAAAATTTAATGCTGCGACAAATAAAGCGGCCTCCAGCAGCACTTCTTTAAACACAAGGAAGCTTGATGAAGAAACTGAGAATCTTCATCATGAACGGGTGCCAACTGAATTAAAGAAAGCCATCCAGCAGGCTAGGTTGGAGAAAAAGCTTACCCAGGCTCAACTAGCCCAGATGATAAATGAGAAGCCTCAAATTATTCAGGAGTATGAATCAGGTAAAGCCATTCCAAATCAACAGATATTAGGTAAACTGGAGAGAGCTCTTGGTGCTAAACTGCGTGGAAAGAAATGA 429 0.4639 MAGVGPLSQDWEPVVIRKKAPTAAAKKDEKAVNAARRSGADIETVKKFNAATNKAASSSTSLNTRKLDEETENLHHERVPTELKKAIQQARLEKKLTQAQLAQMINEKPQIIQEYESGKAIPNQQILGKLERALGAKLRGKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0832 142 MobiDBLite consensus disorder prediction 52 78 - -
Lele29g0832 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 3 142 - -
Lele29g0832 142 MobiDBLite consensus disorder prediction 20 39 - -
Lele29g0832 142 CDD HTH_XRE 85 135 IPR001387 -
Lele29g0832 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Lele29g0832 142 SUPERFAMILY lambda repressor-like DNA-binding domains 81 138 IPR010982 GO:0003677
Lele29g0832 142 Coils Coil 87 107 - -
Lele29g0832 142 Pfam Helix-turn-helix 87 137 IPR001387 -
Lele29g0832 142 MobiDBLite consensus disorder prediction 21 39 - -
Lele29g0832 142 SMART mbf_short4 86 141 IPR001387 -
Lele29g0832 142 FunFam Multiprotein bridging factor 1 71 142 - -
Lele29g0832 142 Gene3D - 71 142 IPR010982 GO:0003677
Lele29g0832 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0832 Lele-ChrLele29 5563668 5566858 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Lele29g0832 MBF1 3.2e-25 No_clan