Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0819 ATGCCAATCGTGGTGACACAGCCTGCATTTCACTTATTTGAGGGTAAGCGACACATGGGACTTGACTTGGATGGATTCACCCTCTCTGCTGTCATCACTGCTTCTAGCAATGATATTCTTTTGATTAAACAGTTGCATTCTTTTGCAATATTGAGCGGCCTTGATTCTTACGCTTCTGTTAACAACGTGCTTGTCACATATTATAGTAAGAATGGTTGTTTCGATGATGCAAAGCGGTTGCTTTATGGAATGGGTGAAATCAGAGATGAGGTGTCTTGGAATTCAATTATTGTGGCATTTGGGCAGCACCGGGAAGGATACAAAGCCCTGGCTCTGTTTCAGGATATGATTCACCTAGGATTCAACTTTGGCAAGTGTTTTGACTTCATTTACATATTGCAGGAAAGTTTTCGAAGAAAATCTTGCTCCAGATTTAGTTCCCTGGAACACAATTATTTCTGGATTTTCCCTGAAAGAGAACTTGTCCGAAGATTCTCTGGCTTGCTTCCGACAGATGCAGCGTGTTGGTTTTCGCCAGACGACTGCAGTTTTGTCTGTGCAATAATTGCAAGCTCTAATTTATCATGCCCCTCTAACGGAAAACAAATTCATGCATTGTCAATAAAATCTGACATCCCTTCTAATCGAATTTCAGTGAATAATGTTCTTGTTGCAATGTACTCTAAATGTGGGAATCTTCAAGACGCAAGAAGGTTATTTGATCGGATGCCAGAACATAATGCAGTATCACTAAATTCAATGATAGCAGGTTATGCACAACACAGTGTCGAGAAGTTTGGGATTGAACCAGAAGCAGAGCATTTTTCCTGCATGATAGATCTTCTTGGCCGAGCTGGAAAACTAAGTGAAGCTGAGAGGATTATGGAGACAATGCCATTTAGTCCTGGATCTGTGGAATGGGGTGCTTTACTAGGCAGATGGGAAGAGGCTGCAAGTATTAAAAGGTTGATGCGGGATAGAGAGGTGAGATGGTCATTGGTGAAAGATGAAGAGAACGGGGTAGAAGAGAAAGAAAGAAGGTTGATGCATCACAGTGACAAGCTGGCAGTCGCATTTGGGCTAATTGCAACCAGAGAAGGGACTCCAATACTTGTTGTGAAGAATTTGAGAATTTGTGCTGATTGCCACAACGCCATTAAATTTATTTCTGCTGTTACCCATAGAGAAATCACTGTTAGAAATGCTTACAGTGACCTAGGTAAGTTGGTGTGTGCAGAAATGGTGGATATCATGAAAAAGCTGGCCAAGCAGGACGTTGAGTTGACTGTGGAAGAGAGAAATTTATTCTCTGTTGGGTACAAAAATGTAGTTGGAGCCAGGAGGGCATCATGGAGGATCTTGTCATCGATAGTACAGAATGAGGAAACAAAAGGGAATGAGGTGAGTGCAAGGCTTATCAAGGATTACATGCACAAAGTGGAGTCAGAGATTTCCAACATTTGCAGCGACATTATGATAATACTAGATGAGCATCTTATCCCATCCACTAATGTTGCGGAGTCATCTGTGTTCTACTATAAGATGAAAGGAGATTATCATCGTTATTTAGCAGAGTTCAGAGCTGGTGATGAGAAGAAAGATGCAGCAGATCAGGCACTCAAAGCATATCAGATGGCCTCTAGCTCCGCTGAGGCGGAGTTATCTGCTACAAATCCCATTCGGTTGGGCCTGGCTCTAAATTTCTCAGTGTTTTATTATGAGATAATGAATTCACCCGAAAGTGCTTGCGGTCTTGCAAGGCGAGCTTTTGATGATGCTTGTGCAGAGCTGGATGATCATGATGAGGAATTGTACAAGGATAGTAGAATGATTTTGCAGCTATTGAGAGAGAACTGTGATTTGTGGAACTCTGATTTGCAAGAAGGTGGTGTTGAAGAGCTTTTCAAATTTCAAGGCAAGCCAAAAAGTAAAAACTTCAAGATAATGAAGATTTCTCAGTCCAATGATCTTTACCAAAACCAAAGGCAAGTAAGACGAAAAATTAGCAGTGGTGCAGGGCAAAGATTAGGTGGGGAAGAAACCTCTATATGGATGGTGCACCTTGTCGACTTTGATTTGGTTTAA 2085 0.4163 MPIVVTQPAFHLFEGKRHMGLDLDGFTLSAVITASSNDILLIKQLHSFAILSGLDSYASVNNVLVTYYSKNGCFDDAKRLLYGMGEIRDEVSWNSIIVAFGQHREGYKALALFQDMIHLGFNFGKCFDFIYILQESFRRKSCSRFSSLEHNYFWIFPERELVRRFSGLLPTDAACWFSPDDCSFVCAIIASSNLSCPSNGKQIHALSIKSDIPSNRISVNNVLVAMYSKCGNLQDARRLFDRMPEHNAVSLNSMIAGYAQHSVEKFGIEPEAEHFSCMIDLLGRAGKLSEAERIMETMPFSPGSVEWGALLGRWEEAASIKRLMRDREVRWSLVKDEENGVEEKERRLMHHSDKLAVAFGLIATREGTPILVVKNLRICADCHNAIKFISAVTHREITVRNAYSDLGKLVCAEMVDIMKKLAKQDVELTVEERNLFSVGYKNVVGARRASWRILSSIVQNEETKGNEVSARLIKDYMHKVESEISNICSDIMIILDEHLIPSTNVAESSVFYYKMKGDYHRYLAEFRAGDEKKDAADQALKAYQMASSSAEAELSATNPIRLGLALNFSVFYYEIMNSPESACGLARRAFDDACAELDDHDEELYKDSRMILQLLRENCDLWNSDLQEGGVEELFKFQGKPKSKNFKIMKISQSNDLYQNQRQVRRKISSGAGQRLGGEETSIWMVHLVDFDLV 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0819 694 PANTHER 14-3-3 PROTEIN 412 627 IPR000308 -
Lele29g0819 694 Pfam 14-3-3 protein 412 623 IPR023410 -
Lele29g0819 694 SUPERFAMILY 14-3-3 protein 415 632 IPR036815 -
Lele29g0819 694 PRINTS 14-3-3 protein zeta signature 427 456 IPR000308 -
Lele29g0819 694 PRINTS 14-3-3 protein zeta signature 476 500 IPR000308 -
Lele29g0819 694 PRINTS 14-3-3 protein zeta signature 569 595 IPR000308 -
Lele29g0819 694 PRINTS 14-3-3 protein zeta signature 542 568 IPR000308 -
Lele29g0819 694 PRINTS 14-3-3 protein zeta signature 507 529 IPR000308 -
Lele29g0819 694 PRINTS 14-3-3 protein zeta signature 596 625 IPR000308 -
Lele29g0819 694 SMART 1433_4 400 636 IPR023410 -
Lele29g0819 694 Gene3D Tetratricopeptide repeat domain 173 391 IPR011990 GO:0005515
Lele29g0819 694 Gene3D Tetratricopeptide repeat domain 6 132 IPR011990 GO:0005515
Lele29g0819 694 Pfam PPR repeat 274 298 IPR002885 -
Lele29g0819 694 Pfam PPR repeat 62 85 IPR002885 -
Lele29g0819 694 Pfam PPR repeat 221 246 IPR002885 -
Lele29g0819 694 Pfam PPR repeat 91 121 IPR002885 -
Lele29g0819 694 Gene3D - 394 634 IPR036815 -
Lele29g0819 694 TIGRFAM PPR: pentatricopeptide repeat domain 91 121 IPR002885 -
Lele29g0819 694 Pfam DYW family of nucleic acid deaminases 342 402 IPR032867 GO:0008270
Lele29g0819 694 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 216 250 IPR002885 -
Lele29g0819 694 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 89 123 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0819 Lele-ChrLele29 5429135 5434302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0819 413 630 14-3-3 family AT1G34760 68.349 1.28e-103 315