Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0810 ATGTCCTCATGTAAGGACTTCCGTTGTACACATCTGAGCCATTATGTAACCATAATAATGTTAAGGATTGATGATAATAATTTCAGTTTGCTCGGCAAATTTTCTTTGGCCAACGTTGTTTTATACAATGGAATTAAGGATACAATGAAACTTTTAAGGTGTTACAATTTAGCTGAGCTGCTAATTTTGTCACCTCTTTTGCAATACCTGAATATTAGAGCAATAATGGGATGTTCGAAACGAGGGTTTGCTGTCTGCAGTTGTCTTTGCATTGGCCATTGGTTCATGATATTAGTGATTTCTTTCATCGTGGGACATTGTGTTATTTACTCGTGCAATGGCCAGGGCTTAGTGTCTGTGTCTGATGAATCTTCATGTTCTTTTTCTTGGACAATATCATTGGAAGACTGGCTGGTGGATGTAACCTGGATAAGGCATATCGATCATAAACTTGAAGGAATTAGTACAGAGGTGGAAGACATCATAGAAGAGGTGGAAACCATTAAAGAGCATTCGCTAGCCTCAATGTTTGAACTGGAGATGGATTTTGGGCTAAATGATAGAAACTGGTTGAATTACATTTACCAGAAAATTGAAGATTTGGCTACAGATGTGGAAAATATCATTAGAGAGGCCCTGAATCATGGAAACCGAGTCTGTTATGATATTCAGGAGCTAATTCAGGAAGTTGGTGCAAATTTCAGTGGTGATCACGACGGTTATGAACATGATGATGATGTCAACACCGATGATGATGAGGATGACGATGCTCAAGTCAGCACCGATGATAAAGATGATGGCAATGACAGGGATGATGAAGATTACAGTGATGATGGGAGCAACGACGATGAAGACGAGCTACTTCAGGAAGTTCATGCAAATCTCAGTGGCGACCGCTATGGCGAAGATGATGATGATTTCAGCACCAATGAAGACAATGACCATGAAGTCAGAACTGATGATGTAGATGACGAGGACAATGATAAAGTCAGCACCGACAACAACGATGACGATGTCAACACTGACGATGATGATGACAGCAGCGACATCTACAGTGAAGATAACAGCAGCGATGGTGATAATGAAGATGATACCGACAATGCTGATGAGAGTAGCAATGACTATGAAGATGACGGTAATGATGGCAGCAGCGATGATGAAGATGATGGCAGAGATGGTGATGATGAAGGCAGCCACAGCCACAGCCACAACTCAAGAGACACTGCTGGTTTGTCTGAAGGAAACTTGAATGTGAGGAATGAATTCAACACTCAACAATTGAATTTGGCTTTATCTGAAGGTGAGGATCTGGTTGGAGCAAGGGAATACCCCTATGGGAATATAGGGATAGAAGTAGAAGAAGACCCAACAGCAATTTTTGAAGAAAATGATATTGCCCCTCAAATGTTTGATGATTTGACTCCTAGGGATATAGAACAACTTGATGCCTCCACAACTGATGAGATGTTTCATAGTTGTGACTCTGGCCCATGGGGCATTATGTCTGATATTTCATATGAACATGAGAATTTGACAGATGATGAGTTTGAAAAAACCTGGGAACTTATAGATGATAAAGAAGTCCATTCTATCCCTCACCAACTGCAAGGAGGATCAATCAAGTATCTTTATGATGTCCAGTTTGAAGTGGAAGAGTGCTTGGGTTTCAACCAATTTTTAAGGATTTTCAACAAACAGTTGGTGGGATCTGGTTTAGGTAATTTGGAGGAGAAAAATTATGGATTAATGAAACAAATCATGCCGTTTCTTTATGCTCTTCCGTCCGACGGATTTCAAGAGAATATGGTGTGCGGTTTCCGTACGTGTGGCCTACGTTTTCCTCACCTCCCGGGGATACCGCTATTTCCACCACCTCGTTGTTTCTCACTTACTTGCCGGTGCCGACGGACTCTGGTTACCGCGTCTGCAGTCTCTGAAACTTACAAGAAGAAGGAGACTAAAGAGAAGGTCATTGTGATTTCTGGACCCACTGGCGCCGGTAAAAGCCGACTTGCATTGGAACTCGCGAAGCGGCTCAATGGCGAAATTGTCAGTGCCGACTCTGTCCAGGTGTACCAAGGTCTTGATGTTGGATCCGCTAAACCCTCCCCAAATGATAGAAAGGAGGTAAAACATCATCTAGTTGACATATTGCATCCATCTAAAGACTATTCAGTTGGACAATTTTTTGAGGATGCAAGGCAAGCTACAAGATGTATTCTTGACAATGGTCGTGTTCCCATAGTTGTTGGGGGAACTGGGTTGTATTTAAGATGGTTCATATATGGAAAACCTGACGTTCCCATAGTCTCTCCAGATGTCAAATCTGAAGTATATTCAGAGTTAACTGAACTGCAGAAAAATGAAGGTTGGGATGCTGCTGTGCAGTTGGTGGTAGATGCAGGTGACTCGAAGGCCCAAACTTTAGCAGTGAATGATTGGTATCGATTACGGCGTAGCCTAGAGATTATCAAATCTAGTGGATCACCTCCATCTGCTTTTCGGGTGCCATATGATACTTTCAGGGAACAGGGTGATTCTAGTGATACTAATGGTTTTGAATCTTCTGATGTCAAAATTTCTGGTGATTCAATGGAAGATTCCAAGTTCTCAGATTTGCCATATGAGTTCATATGCTTTTTCCTTTCTAGTCAGAGACTTGACCTATATAGAACAATTGACATGCGGTGTGAAGATATGCTTCTAGGAAGGGATGGGATACTGTCTGAGGCTCAATGGCTTCTAAAGTTGGGTCTTCATCCAAACTCCAATTCTGCAACGCGAGCAATTGGTTATAGACAAGCTATGGAATACTTACTTAGATGCCAACAACATGGGGGCCAGAGTTCAGCTGAAGAATTTTACAAGTTTTTATCTGAATTCCAAAGAGAAACTAGGAATTTTGCAAAAAGACAATTAACATGGTTTCGCAATGAGCAAATATACCACTGGCTTGATGCTTCGAAGCCAATGAATGAAATTATTGAATTCATGGACAATGCATATCATGATTGGAGAGGAAATCTCATTGTGCCTAAACACCTTAGAATGTCTAGAGATATACCTAATCGCCAAGAAGCAGCTCAACTTAAGTCTTACCGCACAACAAATAGGCATTTCATGAAAGATGAAGATTGTTCTCATATTCTGGAGTGGTTGGTGGATAAGAAAGACTGA 3177 0.413 MSSCKDFRCTHLSHYVTIIMLRIDDNNFSLLGKFSLANVVLYNGIKDTMKLLRCYNLAELLILSPLLQYLNIRAIMGCSKRGFAVCSCLCIGHWFMILVISFIVGHCVIYSCNGQGLVSVSDESSCSFSWTISLEDWLVDVTWIRHIDHKLEGISTEVEDIIEEVETIKEHSLASMFELEMDFGLNDRNWLNYIYQKIEDLATDVENIIREALNHGNRVCYDIQELIQEVGANFSGDHDGYEHDDDVNTDDDEDDDAQVSTDDKDDGNDRDDEDYSDDGSNDDEDELLQEVHANLSGDRYGEDDDDFSTNEDNDHEVRTDDVDDEDNDKVSTDNNDDDVNTDDDDDSSDIYSEDNSSDGDNEDDTDNADESSNDYEDDGNDGSSDDEDDGRDGDDEGSHSHSHNSRDTAGLSEGNLNVRNEFNTQQLNLALSEGEDLVGAREYPYGNIGIEVEEDPTAIFEENDIAPQMFDDLTPRDIEQLDASTTDEMFHSCDSGPWGIMSDISYEHENLTDDEFEKTWELIDDKEVHSIPHQLQGGSIKYLYDVQFEVEECLGFNQFLRIFNKQLVGSGLGNLEEKNYGLMKQIMPFLYALPSDGFQENMVCGFRTCGLRFPHLPGIPLFPPPRCFSLTCRCRRTLVTASAVSETYKKKETKEKVIVISGPTGAGKSRLALELAKRLNGEIVSADSVQVYQGLDVGSAKPSPNDRKEVKHHLVDILHPSKDYSVGQFFEDARQATRCILDNGRVPIVVGGTGLYLRWFIYGKPDVPIVSPDVKSEVYSELTELQKNEGWDAAVQLVVDAGDSKAQTLAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDTFREQGDSSDTNGFESSDVKISGDSMEDSKFSDLPYEFICFFLSSQRLDLYRTIDMRCEDMLLGRDGILSEAQWLLKLGLHPNSNSATRAIGYRQAMEYLLRCQQHGGQSSAEEFYKFLSEFQRETRNFAKRQLTWFRNEQIYHWLDASKPMNEIIEFMDNAYHDWRGNLIVPKHLRMSRDIPNRQEAAQLKSYRTTNRHFMKDEDCSHILEWLVDKKD 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0810 1058 Gene3D - 654 1049 IPR027417 -
Lele29g0810 1058 Pfam IPP transferase 690 979 - -
Lele29g0810 1058 MobiDBLite consensus disorder prediction 317 393 - -
Lele29g0810 1058 Gene3D - 770 836 - -
Lele29g0810 1058 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 654 999 IPR039657 -
Lele29g0810 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 657 783 IPR027417 -
Lele29g0810 1058 MobiDBLite consensus disorder prediction 286 303 - -
Lele29g0810 1058 MobiDBLite consensus disorder prediction 244 285 - -
Lele29g0810 1058 FunFam tRNA dimethylallyltransferase 9 765 836 - -
Lele29g0810 1058 Hamap tRNA dimethylallyltransferase [miaA]. 657 996 IPR018022 GO:0008033
Lele29g0810 1058 MobiDBLite consensus disorder prediction 234 413 - -
Lele29g0810 1058 TIGRFAM miaA: tRNA dimethylallyltransferase 657 834 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0810 Lele-ChrLele29 5359274 5376270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0810 660 970 C2H2 Transcription Factor Family AT2G27760 25.231 6.75e-15 76.6