Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0806 ATGGAACAACCGGTAATATTGAATGAATGGCAGCTGGAACACCAAAAGGTTCTGAGTCTGGATCCTCAAAGCAACCACCGTCATCACTTTTACCACCACCTCCACTATTTCCCTCATAAAAACCCGCTTCTCAATTCCAGGAATGTAGAGCAAGAACACGACGACCACCACAACGATTCTCCGGTTTTTCCGTCTCCGAAAGACCCAGCTCTCCGTTTCCATCTTCAATATCTGCAACAAAATCACTCTTATGCAGGTTTAGACACAGAGCATAGCTCTCTTCATAATCCCAAGAAGCGGTCGTATATCCTTCCTCCTCCGCTTTCGCCTTCTTCTTCTTCTCCTCTTGTTACTGCTACCGTCGAATATGCAACAAAGATGGGAGAGAGTGCCAATCATCACCAGCGACAGGTAACGACGTCTTCGAGATTGGCGGCGATGAGGGGTGGAATGGGGGAGATTGTGGAGGTTCAAGGAGGCCATATTGTTCGCTCCACCGGGCGCAAAGACCGTCATAGTAAGGTGTGTACCGCTAAAGGACCTAGAGATCGGCGAGTTCGTCTCTCCGCTCATACCGCCATTCAATTCTACGACGTCCAAGACCGCCTCGGCTACGACCGCCCCAGCAAAGCTGTCGATTGGCTCATTAAGAATGCCAAAACTGCCATAGATGAGCTTGCTAAGCTTCCGGCATGGAACCCCAATACGGTAAATCAAAATGCCCAGCAAGAGCAGGAGAGAGAGCAGAATCAGCTGGGGAACGAGAATGTAAACGAGGACGAAAGTCCGATTGGAGTTCACCATGCGGTGGCAGCGGATGCGATGGCTTCTGGTAGCCGGGAAACAAGTACGCCGGCGGGAAGCGGCGGCCGGATTTTGGAGCAATTGGGTGAAAACCCTAACCGTGGTGGATCGGGTTTTCTGTCGCCGACGTTGGGCATTGACATTGCTGACTCCATCAAGTCTTTTTTCCCGATTGGTGTGACGGCGGCGCCAGAGACGAATTCTTCGTCCATACAGTTTCAGAATTACCCACCAGATTTGCTTTCGCGAACTAGTAGCGCTTGCCAGAACCAAGATCTACGGCTCTCGCTCCAGTCCTTCCAGGACCCGATTCTGCTTCACCATGCTCAAACTCAGACTCAGCACCACCATCAACATCAACAGAACGAGCAATTGTTCTCTGCAACAACCCCATTAGGGTTCGATGGGGCTTCTTTCCCAGAGGAACATGGTAGATTGCATAGAATGGTAGCTTGGAATGGTGATGCAGCTGATGCTAGTAATAGTGGCCACGGAGGAGTAGGAGGTTTTATCTTCAACTCACCATCGCCGATGCCGACTCTGCTGCCGCCGCTGTTCGGCCAGAGCCAGTATCTTACTCAGAGGGGACCCCTTCAGTCCAGTAACAATCCTTCGATTCGTGCTTGGATAGACTCATCCACGAGCGATCACCACCACCACCATTATCTTCCACCGACAATCCATCATCAGTCTTCCATCGCCGGCGGCATCGGATTTGACTCCGGTAGCTTCTCTGGTTTCCGCATCCCGGCACGAATCCAGGGTGAAGAGGAGCATGATGGCGTTTCTGACAAGCCGTCCTCTGCTTCCTCGGATTCTCGCCATTGA 1632 0.5165 MEQPVILNEWQLEHQKVLSLDPQSNHRHHFYHHLHYFPHKNPLLNSRNVEQEHDDHHNDSPVFPSPKDPALRFHLQYLQQNHSYAGLDTEHSSLHNPKKRSYILPPPLSPSSSSPLVTATVEYATKMGESANHHQRQVTTSSRLAAMRGGMGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKTAIDELAKLPAWNPNTVNQNAQQEQEREQNQLGNENVNEDESPIGVHHAVAADAMASGSRETSTPAGSGGRILEQLGENPNRGGSGFLSPTLGIDIADSIKSFFPIGVTAAPETNSSSIQFQNYPPDLLSRTSSACQNQDLRLSLQSFQDPILLHHAQTQTQHHHQHQQNEQLFSATTPLGFDGASFPEEHGRLHRMVAWNGDAADASNSGHGGVGGFIFNSPSPMPTLLPPLFGQSQYLTQRGPLQSSNNPSIRAWIDSSTSDHHHHHYLPPTIHHQSSIAGGIGFDSGSFSGFRIPARIQGEEEHDGVSDKPSSASSDSRH 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0806 543 Pfam TCP family transcription factor 167 253 IPR017887 -
Lele29g0806 543 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 131 468 IPR005333 GO:0003700
Lele29g0806 543 MobiDBLite consensus disorder prediction 521 543 - -
Lele29g0806 543 MobiDBLite consensus disorder prediction 238 259 - -
Lele29g0806 543 ProSiteProfiles TCP domain profile. 168 226 IPR017887 -
Lele29g0806 543 MobiDBLite consensus disorder prediction 238 258 - -
Lele29g0806 543 Coils Coil 238 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0806 Lele-ChrLele29 5310210 5312001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0806 146 543 TCP Transcription Factor Family AT3G15030 50.594 3.26e-104 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele29g0806 TCP 2e-32 No_clan